Bombiscardovia nodaiensis: KIM372_11300
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Entry
KIM372_11300 CDS
T09715
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk03030
DNA replication
bnk03430
Mismatch repair
bnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIM372_11300
03430 Mismatch repair
KIM372_11300
03440 Homologous recombination
KIM372_11300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnk03032
]
KIM372_11300
03400 DNA repair and recombination proteins [BR:
bnk03400
]
KIM372_11300
Enzymes [BR:
bnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIM372_11300
DNA replication proteins [BR:
bnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIM372_11300
DNA repair and recombination proteins [BR:
bnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIM372_11300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BDR53223
UniProt:
A0ABN6SDE4
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All DBs
Position
1400528..1401301
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AA seq
257 aa
AA seq
DB search
MTDSMTDSVSNLQKALETAPMQDEQTTLANSWLLGLDTETTGVNAGKDAIVSACLVLRNP
ALGFEGDCVGEWVVNPHRRISAGASKVNGFTNEFLSEHGQEPTQAIGEIASIVAQAQAKR
IPLLAYNAPFDVEMLNGDIERWCADSMEPFDTANMLVVDPLVIDRAISNRRGRRSLQYTT
EYYGVVAHGNFHNATADTIAAVDLIKPMTTLYPQVAHIELGSLMDWQREAHAAWSKSYQE
WAQANGKTRRQLSTHWL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagtatgaccgacagtgtgagcaaccttcaaaaggctttggaaactgcgccg
atgcaggatgaacagaccacgcttgccaactcgtggctcctaggtttggacacggagacc
accggcgtgaacgcgggcaaagacgcgattgtgtccgcctgcctggtcttgcgcaaccct
gccctgggcttcgagggcgactgcgtgggcgaatgggtggtcaacccccaccggcgcatc
tccgcaggagcgagtaaggtcaacggttttacgaacgagttcttgagcgagcacggccag
gaaccgacccaggccattggggaaattgcctctatcgtggcgcaagctcaggccaagcgc
atccccctgctggcctacaacgctcccttcgacgttgagatgctcaacggcgacattgag
cgctggtgtgcggactctatggagcccttcgacacggcgaacatgctcgtggtggatccc
ctggtgatcgaccgggcaatttccaaccgccgcggtcggcgaagtctgcagtacaccacc
gaatactacggggtcgtggctcacggcaacttccacaacgccacagccgacactatcgcc
gccgtggacctgattaagcccatgaccaccctctacccgcaagtggcccatattgagctc
ggcagtttgatggactggcagcgggaggctcacgcggcctggagtaagtcttaccaggag
tgggcacaggcgaacgggaagacacgccggcagctgagcacgcactggctgtaa
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