Bombiscardovia nodaiensis: KIM372_12690
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Entry
KIM372_12690 CDS
T09715
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KIM372_12690 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnk03400
]
KIM372_12690 (xseB)
Enzymes [BR:
bnk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KIM372_12690 (xseB)
DNA repair and recombination proteins [BR:
bnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KIM372_12690 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SMP_2
DUF1378
Motif
Other DBs
NCBI-ProteinID:
BDR53362
LinkDB
All DBs
Position
1596920..1597261
Genome browser
AA seq
113 aa
AA seq
DB search
MAADAAEGKQKVQENEQGGAQQAEPLASTLSDKERETIAKLPYEQARDQLIQAVQALEAG
GLDLDASMRQWEIGEALAKRAQELLGQVRAKLDAAQAEQASAGASAGTQSNLE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagatgcagcagaaggcaagcagaaagtgcaagagaacgagcagggcggggcg
cagcaagccgagccgctcgcttcgaccctgagcgacaaagagcgcgaaaccatcgccaaa
ctcccctacgagcaggcgcgcgaccagctcattcaggccgtgcaagccctagaagcgggc
ggcttagacctggatgcctccatgcgccagtgggaaatcggtgaagccctggccaagcga
gcccaggagctcctgggccaggtgcgcgccaagttggatgccgctcaggctgagcaggcc
tccgccggcgcctccgcaggcacgcaatccaacctggagtag
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