Bombiscardovia nodaiensis: KIM372_14370
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Entry
KIM372_14370 CDS
T09715
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk02024
Quorum sensing
bnk03060
Protein export
bnk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KIM372_14370 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KIM372_14370 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KIM372_14370 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bnk02044
]
KIM372_14370 (ffh)
Enzymes [BR:
bnk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KIM372_14370 (ffh)
Secretion system [BR:
bnk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KIM372_14370 (ffh)
Eukaryotic Sec-SRP protein
KIM372_14370 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
MeaB
CbiA
AAA_22
AAA_31
cobW
nSTAND3
ArsA_ATPase
AAA_24
Zeta_toxin
APS_kinase
AAA_18
AAA_33
Mod_r
nSTAND_NTPase7
Motif
Other DBs
NCBI-ProteinID:
BDR53530
LinkDB
All DBs
Position
1826560..1828167
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AA seq
535 aa
AA seq
DB search
MAAFSSLTDRLSNAFTHLRSKGKLTEADIDGTIREIRRALLDADVSLDVVRSFTAKIRER
ALGAEVSEALNPAQQVVSIVNDELTQILGAGVDRPLNFAKNPPTIIMLAGLQGAGKTTLA
GKLGYWLKDAGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEPGVQTRSSDVVSPGQ
ATGDPVKVARDSIEEAKAKLYDTVIIDTAGRLGVDQELMAQARNIRDAVRPNEILFVIDA
MIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASNGEGLKDFE
VFHPDRMASRILDMGDILTLIEQAQREFDEEESRKAAEKMAEGSYGLDDFMDQIQQVRKL
GSLKSILGMIPGMAQHRKELEQFDEKEIDRTEAIIRSMTPQERRDPKIIDGSRRARIAYG
AGTTVSAVNGLLQRFEQAAKLMKRMSNGARQIPGMPGFGGSKSNKKGKKGKKKGKMRSGN
PMKREQEEQALRERLSGGSSQSGSSFAKPQTPQMPAGMPEIPPNLGGGLSGIFGA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattttcttctttgaccgacaggctttcgaacgccttcacgcatttgcgttcg
aaaggcaagctgaccgaggccgacatcgacggcactatccgcgagattcgccgcgccttg
ctcgacgccgacgtctccctcgatgtggtgcgctcctttaccgcgaaaatccgcgagcgc
gccctgggagcggaagtttctgaggccttgaatccggcccagcaagtggtgtctatcgtc
aacgatgagctgacgcaaattctgggcgcaggcgtcgatcgccccctgaatttcgccaag
aaccctcccaccatcatcatgctggcgggcttgcagggtgccggtaaaactaccttagcc
ggtaagttgggctactggctcaaggacgcgggccacactcccctgctggtggcggccgac
ctccagcgtcccaacgccgtcacccagctacaggtggttggcgagcgcgcgggagttccc
gtctacgccccggagccaggcgtgcagacccgttcttccgacgtggtctcccccgggcag
gccaccggcgacccggtcaaggtagcgcgtgactccatcgaagaggccaaagccaagctc
tacgacacggtcatcatcgacaccgccggccgcttgggcgtggaccaggagttgatggcc
caggcccgcaatatccgcgacgccgtccgccccaacgaaatcctcttcgttatcgacgct
atgattggccaagatgcggtgcagaccgccaaagccttcgacgagggcgtggacttcact
ggcgtcgtgctctccaagctggacggcgatgcccgcggtggcgcggcgctctcggtcgct
tcggtaaccggcaagcccatcctcttcgcttccaacggcgagggtttaaaggacttcgag
gtcttccaccccgaccgcatggcctcccgcattctcgacatgggagacattctcaccctg
attgagcaggcccagcgcgagttcgacgaagaagagtcccgcaaggccgcagaaaagatg
gctgagggctcctacggcctggacgacttcatggaccagatccagcaggtgcgcaagctc
ggctccttaaagtccattctgggcatgattcccggcatggcccagcaccgcaaggagttg
gagcagtttgacgagaaggagattgaccgcaccgaagccatcatccgctcgatgaccccc
caggagcggcgcgatcccaagattatcgacggctcccgccgggcccggattgcctacggc
gcaggcaccacggtttccgcagtcaacggcctcctccagcgctttgaacaggctgccaag
ctcatgaagcgtatgagcaacggtgcccgtcagattcccggtatgcccggtttcggcggc
tccaagtccaataaaaagggcaagaaaggcaagaagaagggcaaaatgcgctcggggaac
cccatgaagcgtgagcaggaagagcaggccctgcgcgagcggctttcgggcggctcctcg
cagtcaggctcgtcctttgccaagcctcaaaccccgcagatgccagctggcatgcctgaa
attccgccaaatctcgggggcggtctgtccggcatcttcggagcctga
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