Bombiscardovia nodaiensis: KIM372_15210
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Entry
KIM372_15210 CDS
T09715
Symbol
rmlB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk00521
Streptomycin biosynthesis
bnk00541
Biosynthesis of various nucleotide sugars
bnk01100
Metabolic pathways
bnk01110
Biosynthesis of secondary metabolites
bnk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KIM372_15210 (rmlB2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KIM372_15210 (rmlB2)
01055 Biosynthesis of vancomycin group antibiotics
KIM372_15210 (rmlB2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KIM372_15210 (rmlB2)
00525 Acarbose and validamycin biosynthesis
KIM372_15210 (rmlB2)
Enzymes [BR:
bnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KIM372_15210 (rmlB2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
BDR53614
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Position
complement(1934664..1935686)
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AA seq
340 aa
AA seq
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MSDESIQRPLITGGAGFIGSNFVHYLSSQAPSVHPVVFDALTYAANVQNLNGIDPASYDF
VCGDIRDGEVLERVVSDYQIDAIVNFAAESHNDNSIVDAAPFISTNVVGTYTLLELARRH
NLRFHQVSTDEVYGDLALDDPGRFTESSPYRPSSPYSASKAAADHLVRAWFRTYGVRVTL
SNCSNNYGPRQHVEKFIPRQITNILDGRRPRLYGDGSAVRDWIGVEDDCSAIWTIVTRGQ
IGQTYLIGANGEHSNREVLELILQLMGRPGDDYIQVADRPGGDRRYALDASKLTQQLDWQ
PKQRDFTAGLAATIDWYRVHRDWWQSSKARTEERYLSQGH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgagtccatccagcgtcccctcattaccgggggagctggtttcatcggctct
aacttcgttcactacctcagcagtcaagccccatccgtccatccagttgtctttgatgct
ctgacctatgcggccaacgtacagaacctgaatggaattgacccagctagttatgacttt
gtttgtggtgatattcgtgacggcgaagtccttgagagagtggtgagcgactaccaaatt
gacgctatcgtcaactttgctgccgagtcccataacgacaattcgattgttgatgcggcc
ccttttatcagcacgaatgtggtgggcacatacaccttgctggagctggcccgtcgccac
aatttgcgcttccaccaggtgtcgactgacgaggtgtacggggatttagccctggatgat
cctggtcgttttactgagtcaagcccttatcggccttcaagcccatattcggcctcgaaa
gctgccgccgaccacttagtgcgggcttggtttcgcacgtatggggtgcgggtaacgctt
tcgaactgctccaacaattatggtccccgccagcatgtggagaaattcataccccgacag
attacgaacatcctcgacggccgccggccccgcctctatggggacggcagcgcggtgcgg
gattggattggtgtggaagatgactgctcggcgatttggacgattgtgacccgtgggcag
attggacagacctatttaatcggtgcgaacggcgagcattcaaatcgggaggttcttgag
ctgattttgcagctaatgggtcgcccaggtgatgactatattcaagtagctgatcgtcct
gggggagatcgccgctacgctctcgacgccagtaagctgacgcagcagctcgactggcag
ccaaagcagcgtgattttacagcaggtttagcggcgactattgactggtatcgggtgcac
cgcgattggtggcagtcttcgaaggcacgcaccgaagagcgatatctgagccagggacac
tga
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