Bombiscardovia nodaiensis: KIM372_16530
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Entry
KIM372_16530 CDS
T09715
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bnk
Bombiscardovia nodaiensis
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnk03032
]
KIM372_16530 (topA)
03400 DNA repair and recombination proteins [BR:
bnk03400
]
KIM372_16530 (topA)
Enzymes [BR:
bnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KIM372_16530 (topA)
DNA replication proteins [BR:
bnk03032
]
Prokaryotic type
DNA Topoisomerases
KIM372_16530 (topA)
DNA repair and recombination proteins [BR:
bnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KIM372_16530 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BDR53746
LinkDB
All DBs
Position
complement(2095275..2098274)
Genome browser
AA seq
999 aa
AA seq
DB search
MAHGNKLVIVESPTKAKKIGGYLGSGYTVMASVGHIRDLAKPSQIPASQKEHFGKFGVDV
DHDFKPYYIVDDNKKKTVSGLRNALKNADELYLATDEDREGEAIAWHLVQTLKPKVPVKR
MVFHEITPEAIKDSLNHTRDVDSNMVVAQETRRVLDRLYGYELSPVLWRKVGPGLSAGRV
QSVATRLIVERERERIAFVRASYWDLLATLSARSDLAQSGQESFQARMVELAGKRLATSK
DFGADGKLTASAQKDKPVQLDQNLSEQLAGELESADFTVVGMETRPYHRRPQPPFTTSTM
QQTAGNRLGMSSRAAMRAAQSLYENGYITYMRTDSVTLSQQAIAAARQSVEEVYGKQYLA
SGPKQYVTKTAGAQEAHECIRPAGSRFRSPQELAATLPPDQLKLYTLIWQRTLASQMADA
TGSTATVRLSAPTASQGEAMFQASGTVIEFPGFMKAMGFSTEAGKQAKRGKQEEETVGDA
NGSLPPMSQGDQLKASAVEAEGHETQPPARYTEASLVKTLEAKEIGRPSTYASIISTIID
RGYVYERGRALIPSWLAFSVIKLLETNFPQYVDYRFTAQMENGLDQIAHGQESGTDWLTR
FYFGSGPGAAKNADEAHRGLQEQVAQLGEIDAHQVNTIAIGDGLQVRVGRYGPYLEDTAH
LDEKGDPKRASLPDTLAPDELTVKKAHELIDTNSGGPRLLGTDPETGGRVELRTGRFGPY
LALITPQMQAEMKEAEEKKEAGAKKVEEPKPKMASLFKSMNPDTVTLEDALKLLSLPREV
GQIELADSKTGEMSKATVTASNGRYGPYLTSTTEAGATDTRSLSSEDQIFTVDAAAAQEL
FNQPKYGRRTRGAAKPPLRELGPDPETGKAVTIKDGFYGAYITDGETNRTLPKQYAAASI
EPEVAFRLLAEKRAAGPTKRRKKASGRKTTSTKAKSSRTTSRTSSTRKATSRKSTASTKA
SSKTSSRKSSAKSTSVAKGKTSTAKAAGRASRKTSEDKA
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcacacggcaacaagctcgtcatcgtggagtcgcctaccaaggcgaagaagatcggc
ggctaccttggctcgggttatacggtcatggcctcagtgggccatatccgcgacctggca
aagccctcgcaaattcccgcctcccaaaaagagcattttggcaagttcggcgtggacgtg
gaccacgatttcaagccttactacattgtggatgacaacaaaaagaagactgtctccggc
ttgaggaatgccctgaagaacgccgacgaactctatctggcaactgatgaggaccgcgag
ggcgaggcgatcgcctggcacctggtgcagacgctgaagcccaaggtgccggtcaagcgc
atggtttttcacgagattacgcccgaggcgatcaaggattctttgaatcacacccgggac
gtggactccaacatggtggtggcgcaggagacccgccgcgtgctggaccgcctttatggc
tatgaactctcgccggtcttgtggcgcaaggtgggaccggggctttcggctggtcgcgtg
cagtcggtggctactcggctgattgtggagcgcgagcgcgagcgcattgccttcgtccgt
gcctcctactgggacctgctcgccacgctgagtgccaggagcgacttagctcagtctgga
caggagtccttccaggcgcgcatggtggagctggctggcaagcggctggcaacgtcgaaa
gattttggcgcagacggtaagctcacagcttcggcgcagaaagacaagccggtgcagctg
gaccagaacttgtccgagcagctggctggtgagctggagagcgctgactttacggtggtg
ggcatggagacgcgtccctaccatcgccgcccgcagccgccgttcaccacttcgaccatg
caacagaccgcagggaaccgcttaggtatgagttccagggctgccatgcgtgccgcacag
agcctgtacgaaaacggctatattacttatatgcgtaccgattcggtcacgctctcccag
caggccattgcagccgcccgtcagagcgtggaagaagtctatggcaagcagtatttggct
tccggccccaagcagtatgtaaccaagacagctggtgctcaggaggcccatgagtgcatc
cgccccgcaggttcccgcttccgctcgccgcaagagttggcagcaactctgccgccggac
cagctcaagctctacacgttgatttggcaacggactctggcctctcagatggcggatgcg
actggctccacagcgaccgtgcgcctgagcgcacccactgcgagccagggagaggcgatg
ttccaggcatctggcaccgtaatcgagttcccgggcttcatgaaggccatgggctttagt
acggaagcaggcaagcaggccaagcgcggcaagcaggaagaggagactgtcggcgatgcc
aatggttccctgccgcccatgagccagggagaccagctcaaggccagcgctgtcgaggct
gaggggcacgaaactcagccgccggcccgctataccgaggcttcgctggtaaaaaccttg
gaagctaaggagattggtcgtccctcgacctatgcctcgattatttcgaccattatcgat
cgcggctacgtctacgagcgaggccgggcgctgattccctcctggctggctttttctgtg
attaagctcctggagacgaacttcccccagtatgtggactaccgctttacggcgcagatg
gagaatgggctcgatcagattgctcacggtcaggagtcgggcacggattggctgacccgc
ttctactttggctctgggccgggcgctgccaagaatgcggacgaagctcaccggggcttg
caggagcaggtggctcagttgggagagattgacgctcatcaggtcaacaccattgccatt
ggcgatggactgcaagtacgagtaggccgctatggcccctacttggaggacactgcgcat
ctggacgagaagggcgaccctaagcgcgcttcgctgcccgatacgttggctcccgacgag
ctgaccgtaaagaaagctcatgagctcattgacacgaactctggcggcccgcgtctgctg
ggcactgacccggagaccggagggcgagttgagctgcgcactggccgatttgggccgtat
ttggcgctcattacgccgcagatgcaggctgagatgaaagaggctgaggagaagaaagag
gcgggtgccaagaaggtggaggagcccaagcccaagatggcttccctctttaagtccatg
aaccccgacacggtgacgcttgaggatgccctgaaactgctctccctgccgcgcgaagta
ggtcagattgagctcgctgattctaagaccggcgagatgtccaaagccacggtcactgcc
agcaacggccgttacggcccctacctgaccagcaccactgaggcaggcgctaccgacact
cgctccttgagctcggaagatcagattttcacagtggacgccgccgctgcccaggagctt
tttaaccagcctaagtacggcaggcggacgcgcggagccgctaagccacccttgcgcgag
ctgggccctgaccctgaaaccggcaaagcagtcaccattaaagacggcttctacggggcc
tacatcaccgacggcgagaccaatcgaaccctgcccaagcagtacgcggcagcctcaatt
gagcccgaagtcgccttccgcctgctggctgagaagcgggcagcagggccgaccaagcgg
cgtaaaaaggccagcggtcgtaagacgacttcaaccaaggcaaagagcagtaggaccacc
agccgtaccagcagcacccgcaaggccacgagtcgtaagagcactgccagtacgaaggcc
tcgagtaagacgagttcccgcaagtcgtcggcgaagtccactagtgtagccaaaggcaag
acgagtacagccaaggcagccgggagagctagccggaagacgagtgaggacaaagcatga
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