Bifidobacterium animalis subsp. lactis CNCM I-2494: BALAC2494_00026
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Entry
BALAC2494_00026 CDS
T01842
Name
(GenBank) Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bnm
Bifidobacterium animalis subsp. lactis CNCM I-2494
Brite
KEGG Orthology (KO) [BR:
bnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnm03019
]
BALAC2494_00026
Enzymes [BR:
bnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BALAC2494_00026
Messenger RNA biogenesis [BR:
bnm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BALAC2494_00026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
DEAD
Helicase_C
AAA_19
AAA_22
SLFN-g3_helicase
T2SSE
nSTAND3
AAA_30
HA2_C
ResIII
AAA_11
NACHT
AAA_16
Zeta_toxin
AAA_23
SRP54
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEK30683
UniProt:
A0A806FIX9
LinkDB
All DBs
Position
1407091..1411203
Genome browser
AA seq
1370 aa
AA seq
DB search
MTCISSPSTAQYLNTDYLQKDVMKFEYPDQLPVSAAREAIANAVRSSQVVIISGQTGSGK
TTQLPKILLELGRGSHGKQIVHTQPRRLAARTVAERLADEMGVRLGDEIGYQVRFTDESS
PKTRLRVVTDGILLAQIQRDPKLTRYDTIIIDEAHERSLNIDFLLGYLTALLPLRRDLKL
IITSATIDSAKFQKHFEDALRTEVPVIEVSGRTYPVTICYEPLGGTPALMRHVPGFADGT
AGDDITNPDAEAMDMPTAVARACTELAILSTHDQGPRDILVFASGERDIRDFEQALRHHF
GPRAADMRRPDAIEIVPLFARLSAKEQHRVFEPHTHQRIVIATNVAETSLTVPGIRYVVD
PGTARISRYSKQAKVQRLPIEPISQASADQRSGRCGRIADGIAIRLYSSEDYESRPRFTE
PEILRTSLGAVVLHMLSVGVARTAEDITDFGFIDPPDIKAVSDGINELTELRAISRKRGV
MQLTHTGRQLARIPIDVRLGRMVIEAARSTTPNTLAAVLVVVAFLSLQDPRERPEEKREE
ADCIHNRYADETSDFLTALNIWDRAYGADGEMSSHALRRLCKTEYLHFLRMRQWRDLVSQ
LRELCRELKFNVGEPIPVSRPPREIRELPISQQAAHSLACSWDSQGIHTSMLAGLLSMMG
MQVVHEPKASDFTGLKGAARARAMKRAQKMAKNDYLGARGTHFAIFPASALSKSTPSWVM
STELVQTSRLWARYCAAIDPAWAEPLAGNLTRTTYANPHWSASRGSAVAESNVLLYGLPI
VQGRTVQWGRINPLEARDFLIRQGLVEGEIQQRFAHDEFIDANRSVIEEAQEESNRTRQV
AQTVSDEDLYDFYNEVIPNTVTCVADLAKWWKGEFEAHPHLLDFDPSKVERLLDQESVSM
EDFPDHWVAVGSDERVIELRLSYVYDTHDPADGVTVHIPLGVLSRISAPQFSWNVPGLRH
ELIVAMIKALPKALRVQFVPAPDTATKIEDWIDSHFQTDPGSGTLDSPAQVDGGVWPDFA
HVFTQAAIEVVGAQIHPEVLDGLADKLPPYLRMNFVIEQPKPRPKRAHRRRSYDDGVVVL
GTGKSLVELQRQFAEQAQESARKIVHRQAQKAAEQGQVVAEADLLRKAGATTEAREEMLW
RGALDRLRLPAERISSRWLGAEALMLASAPYSTTKALADNLQLQTVKRLLPDIAKLSSDE
ALSEAVDGVKEVFEDAVYEVAKDAIEVLRAYAQVDKAVSGKADLPMLSVLQSVREHIATL
VHPGFIGATPPDSFRRLPVYLQADMIRLSKAKTDKNRDVRWAWQADEAKQIVDKALEKAR
KEPAGAKHDELMAKALKARWMLEEFYVSLWAQELGTPYPVSVQRIQKALR
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
ttgacgtgcataagctcgcctagcacagcgcaatacctgaacaccgattatcttcagaaa
gacgttatgaaattcgaataccccgatcagctgcctgtctcggccgcacgcgaagccatc
gccaacgcggtgcgttccagtcaggtggtgatcatctccgggcaaaccggttccggcaag
accacgcagctgccgaagatcctgctcgaactcggtcgcggctcgcatggcaagcagatt
gtgcacacgcagccacgccgtctcgccgcgcgcaccgtggccgaacgcctcgccgacgag
atgggcgtgcgcctgggcgacgaaattggctaccaggtgcggttcaccgacgaaagctcg
ccgaagacacgcctgcgcgtggtcaccgacggcattctgctcgcgcagatccaacgcgat
ccgaaactgacacgctatgacacgatcatcatcgacgaggcgcacgaacgcagtctcaac
atagacttcctgctcggctatctcaccgccctgctgccgttgcgtcgcgacctgaagctc
atcatcacctccgcgacaatcgattcggcgaagttccagaagcatttcgaagacgcactg
cgcaccgaggtaccggtaatcgaggtctccggccgcacgtacccggtcacgatctgctat
gagccgctgggaggcactcccgcgctgatgaggcatgttcccgggtttgcggacggaacg
gccggcgacgacatcacgaacccggacgccgaggcaatggacatgcccaccgcggtcgct
cgcgcatgcaccgaattggcgattctctccacgcatgaccaaggaccacgtgacattctc
gtgttcgcctccggcgagcgcgacatccgcgacttcgagcaggcgctccgccatcatttc
ggcccgcgtgccgccgacatgcgcaggccggacgccatcgagatcgtgccgttgttcgca
cgtctgagcgccaaggaacagcatcgcgtgttcgaaccgcatacgcaccagcgcatcgtc
atcgccacgaacgtggccgagacatcgctcacggtgccgggcatacgctatgtggtggat
ccgggtaccgcgcgtatctcgcgctattcgaagcaggcgaaagtgcagcggctgcccatc
gagccgatctcgcaggcgagtgccgaccagcgttcgggtcgctgcggccgtatcgccgac
ggcattgcgatccgcctgtattcgagtgaggattacgagtcacgcccgcgtttcaccgag
ccggagattctacgcacgtcgctcggcgcggtcgtgctgcacatgctctcggtgggcgtg
gcgaggacggcggaggacatcaccgatttcggattcatcgacccgcctgacatcaaggcg
gtctccgacggcatcaacgaactcaccgaattgcgtgcgatttctcgcaaacgcggcgtc
atgcaactgacgcacaccgggcgccagcttgcgcgcataccgattgacgtgcgtctgggc
cgcatggtgatcgaggccgcccgctccaccacgccgaacaccttggccgcagtgctcgtc
gtcgtggcgttcctgagcctgcaggatccgcgtgaacgccccgaggagaagcgcgaggag
gcggattgcatccacaaccgctacgccgacgagaccagtgattttctcaccgcactgaac
atatgggaccgcgcatatggggcggatggcgagatgagcagccatgcactgcgcaggctg
tgcaagactgaatacctgcatttcctgcgtatgcgccagtggagggatctcgtctcgcag
ctgcgcgaactgtgccgcgaactcaagttcaatgtgggcgaaccgattccggtgtcgcga
ccgccgcgtgagatccgggaactgccgatcagccagcaggctgcgcattcgctcgcctgt
tcatgggacagccaaggcattcacacctccatgttggccggtctcctctcgatgatgggc
atgcaggtcgtgcatgagccgaaggcatctgatttcaccggtctcaagggtgccgcccga
gcgcgggcgatgaaacgtgcacagaagatggcgaagaacgattacttgggtgcgcgaggc
acgcatttcgcgattttcccggcgtcggcactctcgaaatccacgccgagctgggtgatg
agcaccgaactcgtgcagacgagccggttgtgggcgcgctactgcgctgcaatcgaccct
gcgtgggcggagccgctcgccggcaatctgacccgcaccacgtatgcgaacccgcactgg
tccgcctcacgtggctccgcagtggcggaatcgaatgtgctgctgtatgggctgcccatc
gtgcaggggcgcaccgtgcagtgggggcgcatcaacccgctcgaggctcgtgatttcctg
attcgtcagggacttgtggaaggtgagattcagcagcggttcgcgcacgacgagttcatc
gacgccaaccggtcggttatcgaggaggcccaggaggagtcgaatcgcacacgtcaggtg
gcgcagacggtgagcgacgaggatctgtacgatttctacaacgaggtgattccgaacacg
gtgacctgcgtggctgacctggcgaaatggtggaagggcgagtttgaggctcacccgcat
ctgcttgatttcgatccgtccaaggtggagcggctcctcgatcaggaatcggtgagcatg
gaggacttccccgaccactgggtcgccgtcggttccgacgagcgtgtgattgagctgcgg
ctgagctacgtttacgacacgcacgatcctgcggacggcgtcaccgtgcacattccgctc
ggcgtgctctcacgcatctcggcaccgcagttcagctggaatgtgcccgggctgcgtcat
gagctcattgtggcgatgatcaaggcattgccgaaggcgctgcgcgtgcagttcgtgccg
gcgccagacaccgcgacgaagatcgaggactggatcgactcccatttccaaaccgacccg
ggttccggcacactggattcccctgcacaggttgacgggggcgtgtggccggatttcgcg
cacgtgttcacacaggccgccatcgaggtggtcggggcgcagattcacccggaggtgctc
gatggcctcgccgacaagctgccgccatacctgcgcatgaatttcgtgatcgagcagccg
aagccccggccgaagcgtgcccaccgccgccgttcgtacgacgatggcgtggtggtgctc
ggcacaggcaagtcgctggtcgagctacagcgccagtttgccgaacaggcgcaggaatcc
gcacgcaaaatcgtgcaccggcaggcccagaaggccgccgagcagggtcaggtggtggcc
gaggcggatctgctgcgcaaagccggtgccaccacggaggcgcgcgaggagatgctctgg
cgaggggcgctcgatcggctgcgcctgcctgccgaacgcatctcgtcacgctggctcggt
gccgaggccctcatgctcgcatcggctccgtattcgaccacgaaggcgctcgccgacaac
ctgcagttgcagacggtgaagcgattgctgccagacattgcgaaactgagctccgacgag
gcgttgagtgaggccgtggatggcgtcaaagaagtgttcgaggacgccgtgtatgaggtg
gccaaggacgcgatcgaggtgctgcgggcctatgcgcaggtagacaaggcggtcagcggc
aaggccgacctgcccatgctctcggtgctgcagtcggtgcgcgaacatatcgccacactc
gtgcatcccggtttcatcggcgccacgccgcccgattcattccgcagactgccggtctac
ctgcaggccgacatgatcagactctccaaggcgaaaaccgacaagaaccgcgatgtgcgc
tgggcgtggcaggccgacgaagccaaacaaatcgtcgacaaagcgctcgaaaaggcacgc
aaggagccggccggggccaagcacgacgagctcatggccaaggcgctcaaggcacgctgg
atgctcgaggagttctacgtgtcgctctgggcgcaagagctcggcactccttacccggta
agtgtgcagcgcatccagaaggcactgcgttag
DBGET
integrated database retrieval system
