Brettanomyces nanus: FOA43_000046 Help Entry FOA43_000046      CDS       T07002                                  Symbol FAL1 Name (RefSeq) RNA helicase   KO K13025   ATP-dependent RNA helicase [EC:5.6.2.7] Organism bnn  Brettanomyces nanus Pathway bnn03013   Nucleocytoplasmic transport bnn03015   mRNA surveillance pathway bnn03040   Spliceosome Brite KEGG Orthology (KO) [BR:bnn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     FOA43_000046 (FAL1)   09122 Translation    03013 Nucleocytoplasmic transport     FOA43_000046 (FAL1)    03015 mRNA surveillance pathway     FOA43_000046 (FAL1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bnn03019]     FOA43_000046 (FAL1)    03041 Spliceosome [BR:bnn03041]     FOA43_000046 (FAL1)    03009 Ribosome biogenesis [BR:bnn03009]     FOA43_000046 (FAL1)    03012 Translation factors [BR:bnn03012]     FOA43_000046 (FAL1) Enzymes [BR:bnn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      FOA43_000046 (FAL1) Messenger RNA biogenesis [BR:bnn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      FOA43_000046 (FAL1)    mRNA cycle factors     Stress granule specific factors      FOA43_000046 (FAL1) Spliceosome [BR:bnn03041]  Complex C   Other components    EJC/TREX     FOA43_000046 (FAL1) Ribosome biogenesis [BR:bnn03009]  Eukaryotic type   90S particles    Helicases     FOA43_000046 (FAL1) Translation factors [BR:bnn03012]  Eukaryotic type   Initiation factors    eIF-4     FOA43_000046 (FAL1) SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_19 AAA_22 NAT10_TcmA_helicase SMIM39 Flavi_DEAD AAA_30 Motif Other DBs NCBI-GeneID:  62193447 NCBI-ProteinID:  XP_038776310 UniProt:  A0A875RXL0 LinkDB All DBs Position 1:117658..118848 Genome browser AA seq 396 aa AA seqDB search MEFNKDLDKSLKFKTTKSVPVVPTFEEMDLKEDLLRGVYGYGFEAPSAIQSRGIMQIISG KDTIAQAQSGTGKTATFAIGMLQVIDIKKKDTQALVLSPTRELAMQIQNVVKSLGDYMNV KCHACTGGRAVGDDTKQLAKGQHIVSGTPGRVLDMINRRVLNTRHIRILVMDEADELLGK GFQDQISDIYKFLPPGTQVVVVSATLPKSVLVMTKKFTNNPVKILVKRDDITLEGIKQYY IQVEKEDWKFDTLCDLYDSLTITQAVIFCNTKKKVDWLANSLRKANFTVVSMHGDMKQEE RDRIMNEFRLGNSRVLISTDVWARGIDVQQVSLVINYDLPSDRESYIHRIGRSGRFGRRG IAVSFVTKDDVLTLHDLERFYTTEIEEMPGDLGSIM NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt atggaattcaacaaagatctcgacaagagtctcaaatttaaaaccactaaaagtgtcccc gtggtaccaaccttcgaagagatggacctcaaagaggaccttcttcgaggagtctacggc tatggattcgaggctccttcggccattcaatctcgtggtatcatgcaaatcatttctggt aaagacacaatagctcaggcccaatctggtacaggtaaaacggccacatttgcgattggt atgcttcaggtgatagatattaaaaagaaagatactcaagcactagttctttcccccact agagaattggctatgcagattcaaaacgttgtgaaatcgttgggtgactatatgaatgtt aaatgtcatgcttgtacaggaggacgagcagttggagatgatacgaagcaactagctaaa ggccagcatattgtgagtggtactccaggtagagtcctcgatatgattaatagaagagtg cttaatactagacatatcagaatacttgttatggatgaggcagacgaattgttaggaaag ggatttcaggatcagatttccgatatatataaatttttacccccaggaactcaagtggtg gtggtcagtgctacccttccgaaaagcgtgctagtaatgaccaaaaagttcaccaacaat ccagtcaagatcttagtgaagagagatgacatcacattggaaggtatcaagcaatactat attcaggtagagaaagaggattggaaattcgacactttatgcgatctctacgattctctc acgattacccaagccgtgatattctgtaataccaagaagaaagtggactggttggcaaac tctttgagaaaggcaaacttcacagtggtttcaatgcatggagacatgaaacaggaggaa agagatcgaattatgaacgaatttcgattgggaaactcaagagttcttatatccacggat gtgtgggccagaggtatcgatgttcagcaagtttctctcgtgataaattatgatcttccc tcggatagagagagctacattcatagaataggtcgatcaggcaggtttggaagacgtgga attgctgtgagcttcgtaacaaaggatgatgtgctgactcttcacgatttggagcggttc tatactactgagatcgaggaaatgccaggtgatttgggtagtatcatgtaa

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