Brettanomyces nanus: FOA43_000152
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Entry
FOA43_000152 CDS
T07002
Symbol
SMD2
Name
(RefSeq) mRNA splicing protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
bnn
Brettanomyces nanus
Pathway
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_000152 (SMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_000152 (SMD2)
03032 DNA replication proteins [BR:
bnn03032
]
FOA43_000152 (SMD2)
Spliceosome [BR:
bnn03041
]
Complex A
U1 snRNP components
Sm proteins
FOA43_000152 (SMD2)
U2 snRNP components
FOA43_000152 (SMD2)
Complex B
U1 snRNP components
FOA43_000152 (SMD2)
U4/U6.U5 tri-snRNP components
FOA43_000152 (SMD2)
Complex C
U2 snRNP components
FOA43_000152 (SMD2)
DNA replication proteins [BR:
bnn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FOA43_000152 (SMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
62193553
NCBI-ProteinID:
XP_038776415
UniProt:
A0A875RMX6
LinkDB
All DBs
Position
1:complement(293260..293607)
Genome browser
AA seq
115 aa
AA seq
DB search
MSELLNKAKTEMSEKELQDLEEYEFEHGPMKLLTQAVQKNTTVLISLRNNHKLIAKVKAF
DRHCNMILENVKEIWNEPAPNDKKKKVLRERFVLKMFLRGDSVIVILNHNETGGK
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattactcaataaggcaaagacagaaatgtctgaaaaggagcttcaggacctc
gaggaatatgaattcgagcatggccctatgaagctcttgactcaagcagttcaaaagaac
acaaccgttctcatctctctaaggaacaaccacaaactgatagccaaggtgaaagcattt
gatagacattgcaatatgatattagaaaatgtcaaagaaatctggaacgaaccggcaccc
aatgataagaagaagaaggttcttagggaaagattcgtgcttaagatgtttctccgggga
gattccgttatagtgatattaaaccacaacgaaacaggagggaaatga
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