Brettanomyces nanus: FOA43_000300
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Entry
FOA43_000300 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
bnn
Brettanomyces nanus
Pathway
bnn03013
Nucleocytoplasmic transport
bnn03015
mRNA surveillance pathway
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_000300
09122 Translation
03013 Nucleocytoplasmic transport
FOA43_000300
03015 mRNA surveillance pathway
FOA43_000300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000300
03041 Spliceosome [BR:
bnn03041
]
FOA43_000300
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
FOA43_000300
Spliceosome [BR:
bnn03041
]
Common components
Common spliceosomal components
Cap binding complex
FOA43_000300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Collagen
Flexi_CP_N
Motif
Other DBs
NCBI-GeneID:
62193701
NCBI-ProteinID:
XP_038776561
UniProt:
A0A875RW57
LinkDB
All DBs
Position
1:630494..631525
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AA seq
343 aa
AA seq
DB search
MSSLGEFDTTSFKNSTFRLDRPSAYLVNKARRDEANGYSNLKKSMESATVYIGKLSFTTT
EEQLFELFSDCGTIKQIIMGLDKNKLTPTGFCFIIFQKANSALNAVKFLNKSKINGKPMD
IDLDPGFEEGRQFGRGLDGGQKQHVLQRRRLKRRYRERYDDRGSRGDRGDRDNRGNWGSR
GNRGDFGDRGDRGGDRNRGYRQSYRGGPRRGYRAERGDRDNYHGDRERRYNDGLQYNRRP
QNIDSHQYNDRPQYDSFTSREPEQDFRYASTREREFQHETYVPPDADHREHTEQGSGFAG
ATGSTRVTGAPGDKDEYVPDDGRSDFHGDNDKETQELPPHLQH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtttaggagaatttgataccacaagcttcaaaaattcgacctttaggttagat
aggccctcggcatatttggtcaacaaagctcgcagagatgaagctaatggatattctaac
ttgaagaagtcgatggagtcagcaacagtatacatagggaaattgtcgtttactacaacg
gaagagcaattgtttgaattattcagtgactgtggtacaatcaagcagataataatggga
ttggataagaataaattgacacctacaggtttctgcttcatcatattccagaaagcaaat
agcgcactcaatgcagtgaaatttttgaacaagtccaagattaatggtaagccgatggat
attgatcttgatcctggttttgaggagggtcgtcaatttggaaggggtcttgatggaggt
cagaaacagcacgttcttcaaagaagacggctcaagagaagatacagagagagatacgat
gaccggggcagtcgtggtgatcgaggtgatagggataaccgtggtaactggggcagccga
ggtaaccgtggtgatttcggagatagaggcgatcgaggaggggaccgtaatcgtggatac
agacagagttacagaggtgggcctagacgtggatatcgtgctgagagaggtgatagagat
aactaccacggagatcgtgagcgcagatataatgacggtctgcagtataatcgcaggccg
cagaatatcgatagtcatcagtacaacgacagacctcaatatgatagttttacgtctcgc
gagcctgagcaggatttcagatatgcatcaacacgggagagagagtttcagcacgaaaca
tatgtaccgccagatgctgatcatagagagcatactgagcagggaagtggtttcgctggt
gctactggttctactagggttactggtgctcctggtgataaggatgaatatgttccggac
gacggtcgttccgactttcacggagataatgataaagaaacccaggagcttccaccccac
cttcaacactaa
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