KEGG   Brettanomyces nanus: FOA43_000301
Entry
FOA43_000301      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K06100  symplekin
Organism
bnn  Brettanomyces nanus
Pathway
bnn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    FOA43_000301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bnn03021]
    FOA43_000301
   03019 Messenger RNA biogenesis [BR:bnn03019]
    FOA43_000301
Transcription machinery [BR:bnn03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     FOA43_000301
Messenger RNA biogenesis [BR:bnn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     FOA43_000301
    U7-dependent histone pre-mRNA processing factors
     FOA43_000301
SSDB
Motif
Pfam: SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 62193702
NCBI-ProteinID: XP_038776562
UniProt: A0A875RSZ3
LinkDB
Position
1:631950..634175
AA seq 741 aa
MSSSVPTEEHLNAQTHQIEEATKLAFDDSKYFDQVLDTIATISISQPIDNYIIQSHCLEF
VYQAYYLRKIQSFELRCNNSTKIIDMLSRLIMVEESDQVHNRLPKYKITERCIEILSSTY
DLMFYRFIDHPDKPLWATLCKTRDFVVSQWPSAYPLLSYNRDADWYRSISCKNATIRLIG
KVIATHLPPASSSRDKKVKDMNDISIALVDKDHPFLYNSNIGSQGQALLDRLFSTVNDDI
LIPTAVFSAVVSVLMTLFRLRPNVVSSKFLSFILGYEAQLKRDPKFEADKLKLRMNRRFN
DRLDKIIISLLLNRGFINKDPSLKARFENKLRYLVDKTAELRKKSILEDSEDDEDEDEVQ
RLRKRRKLADKDNKMHEPIDFYNECRIARANDYKSIYSLLKPGDALENFDMSTISPDMLS
KMVIAALSKVDIQKLAKGLGLASDRYIEIMTRDDYMFAGNADLGDENEGDDTYDPSAVVK
SESKIPSDDDDEDDVFSEEDVYSVPLPKTLDINQKKVQIKSIIDNFIRLASQNVDDNTDE
PISGNNLSKVAISKWKSDSWIKILSRLATRGTILNEEISNYIREAIFEYFQVDIKDGLTG
VIEWLNEEYYNESIKSEDAGNEETHTTYTHYTGKVLDTLIPFLDPSDRKVFIRLLSELPY
LSKEMILKIRSVCADPARSKLGFQSVLYLMMFRPPLFQGCIDLLKEMYVEADNKNNEQLK
NSCLKYLKKYAPKEIPATDGS
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtcgtcatcagtgccgaccgaagaacatttgaatgcacaaacccatcagattgaagag
gctaccaagttggccttcgatgatagcaaatattttgatcaagtgttggatactattgcc
accatcagtatatcacaaccaattgacaattacattatccaatcgcattgtctcgagttt
gtttaccaagcatactacttgagaaagattcaatctttcgaacttcgatgcaataattct
acaaagattattgacatgttatcaagactgattatggtggaagagagtgaccaagttcac
aataggctgccaaaatataagattactgaaagatgtattgaaatattgtcaagcacttat
gacttgatgttctaccgatttattgatcatcctgataaacctctatgggctactttgtgc
aagactagagactttgtggtctcccaatggccaagtgcttaccctttactatcatataac
cgagatgctgattggtacagatctatcagctgcaaaaatgctacaattagactcattgga
aaagtgatagcaacacatcttcctcctgcatcttcctctagagataagaaagttaaagat
atgaacgacatttccatagctctggtagataaagatcatccatttctttacaattctaac
attggctctcagggacaggcattgcttgataggttattttctactgtgaatgatgatata
ctcattcctacggctgtgttttcggccgttgtctctgtgcttatgacgttatttagattg
agacccaatgttgtttctagtaaatttcttagctttatccttggctatgaggcgcaactt
aaacgagatcccaagtttgaagctgacaaattgaaattgagaatgaataggcgattcaat
gatcggctcgacaaaattatcatttctctgctacttaataggggtttcatcaataaggat
ccaagcttgaaggcacgttttgagaataagctaagatatttagtagataaaactgctgaa
ttgagaaagaaaagtattctagaagatagtgaagatgacgaggatgaggatgaagtgcag
aggcttcgtaaaagaagaaaattggctgataaagataataagatgcatgaacctattgat
ttctacaacgaatgccggatagctcgtgcgaatgattataagtctatttactcattgctc
aaacctggagatgcacttgagaactttgatatgtccaccatatctcctgacatgctttct
aagatggtaattgcggcattatctaaagttgatattcagaaattggcgaaaggcttaggg
ttggcttccgataggtacatagagatcatgacccgtgatgattatatgttcgcgggaaat
gcggatttgggcgatgagaatgaaggtgatgatacttacgatccttcagcagtcgttaaa
tcagaatccaagatcccttctgatgatgatgatgaagatgatgtattttcggaggaagat
gtttactccgtcccattgccaaaaactcttgacatcaaccaaaaaaaggtacagatcaaa
agtatcatcgataactttatcaggcttgcctctcagaatgttgatgataataccgatgag
ccgatttctggaaataatcttagtaaggtcgcaatttcaaaatggaaaagtgattcttgg
ataaagattctttccagactggctaccagaggtactattttgaacgaagaaatttccaat
tatattagggaggccatctttgagtattttcaagttgatataaaggatgggcttaccggt
gttatagagtggctcaatgaagagtattacaacgagagtattaaatcggaagatgcgggt
aatgaagaaactcatacaacatatacacactataccggcaaagtcttggataccttgatt
ccatttttggatccctctgatagaaaagttttcatccggttgctcagtgagttgccatac
ctaagtaaagagatgatcctaaagataaggtcagtttgcgcggaccctgcaagatcaaag
cttggcttccagtcggtgctttatctcatgatgtttcgtcctcctctgtttcaaggttgt
attgacttgttgaaggaaatgtatgtggaggcagataataagaacaatgaacaattgaaa
aactcatgtttgaagtatctaaagaagtatgcgccgaaggagattcctgctacggatggc
agctaa

DBGET integrated database retrieval system