Brettanomyces nanus: FOA43_000367
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Entry
FOA43_000367 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K18715
nucleoporin NUP159
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000367
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOA43_000367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
62193768
NCBI-ProteinID:
XP_038776628
UniProt:
A0A875RX16
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All DBs
Position
1:complement(join(780176..784213,784275..784337))
Genome browser
AA seq
1366 aa
AA seq
DB search
MNTLCDTTNMPYTEIDNLELEEFGFQSRRPVQLFGVDQMDALRKGYLNCLAVSYKHQMII
AAFGDKIKLIRISELSHVLESDTEDKETGSSPAIDFTDKTTIKLSASVQQIYLNADEQHL
VILFDGCHRIGVVELGKVINGQWTGSLTKIRLTKMPGRIVEASFSKTNPNLVLLLLDIDE
LWLMDLQQKDITTSTKLIKKEVTAACWTQDAENQIYIGSSLGKNISVINIRGETLSSIKF
EDTSLEEIFKPLHITQMNEDTTLVIYGISREVKDVNPEFRSFVFTKGSFTKEVKDVCMLF
AEFHQNIAFYETHLNHWCKDFPYLTFTIASNSTDFNALTPECQIIELNDSDRAQMPLDPE
TNADDTPIGFIMDLQASEQVKQPCMTLDSSGPLPRFIILSHRGQLLTWNIWYTKAIKAQE
DDLSAALSCVLKAPQEVKLPTHTQVQASSPAIQKATNLDFPKSDSIFSKHEMGNPFGSTS
NPFGSGKDCVVPENVTSPLIKTARSPKLQGNMDTTSYLHEKPAPNNPPNASPVFGKSGIQ
NSTRFSLSARAGSDAPNIKNSTNSGFSAFASNGSSPFGAFASKDQTSPFGVIAAKGAHTS
PFGDSFKLGAQNKKSSMLGFGQSSGKMDGDNSESPFKFKAKSDEASPIVKLLSSKDKSQP
VFGINTSHKSPFEKLAESSGKSTGKAFNFAGFALSMSEKNSNNRNEPDESEEESDNDKVD
QDEYDSEFDFDRDDESDNDTKLNEERYAPFVPLQEEKIEDSTSVTVPEDAERIQVEREIF
NQREKMKKTTSGEDSELNGLEEKVGNSLPGTEGEQQGSKEATEKSVQTKEEFEESTKKST
EDDTKGFEFPSHENELIKKFKHPTLANDLLSSRYADGESVQTNQLEEENKAVDIRPESAE
KDEVKSEDEMSQLRKASGSEYLIPMAQTNLEDDKAVEKEENSSKMEPNSSDVEVETAEAG
SSASSEESYERIDKREVEEQADHIQEMKQSETTSDAAVVPSSTDAYLTSGTREDKAATDQ
AKLVRQATDTPSLLNTEKVETETMEYKDEKIEVGNQHYADFKVESFEDEEVYLSKLALPP
SVPPLLTVKIVEYPNEDKPAVEKEMLEVVYDTETDLEFLQRNINQLNLFLSKHMDDSVMH
TLEKSIGFSDFWRLNEVGTVEAGIQNTTKTLTNMMAQLRDVITRVTKLNEEVASCMRRTP
AIKESLLIEPQAVVISRKGGLTFDSMQRCHKINLLVNKVKSMDSQLQSKLLILNSLVHPE
ALTEHPQNMDIVISAMDSRFQQLLDGLYDIKKEYDSVATMRQYKDSDNTISDLFDNPKNS
LKAFIKGDRTENETIRVSSIISAVGSRSRLGKMFHDRAFHPRKVTL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccttgtgtgacacaacgaacatgccatatacagagatagacaatttggaactg
gaggagtttggcttccaaagtagaaggcccgtccagctttttggcgttgatcaaatggac
gctctcaggaagggctatttgaactgcttggccgtctcttacaaacatcagatgatcatt
gcggcttttggcgacaagataaagttgatacgtatttcggaactttctcatgtcttggaa
tcagatacagaagataaagaaaccgggtcttcccctgctattgatttcacagataagacc
actatcaaacttagcgcatcggttcaacaaatttacttgaatgccgatgagcagcatcta
gtcattctttttgatggctgtcatcgcattggtgtcgttgagcttgggaaggtcataaat
ggccagtggacaggatcattaacaaaaataaggttgactaagatgcctggaagaatagta
gaagcttcattttccaaaacgaatccaaatttagttttacttcttttagatatcgacgag
ctttggctaatggacttacagcagaaagatatcacaacgtctaccaaacttattaaaaag
gaagtaacggctgcctgctggacccaagatgcggaaaatcagatatatataggaagttct
ttgggaaagaacatttccgttattaatattagaggagaaacgttgtcttccattaagttc
gaagatactagtctcgaggagatcttcaagccattacacataacgcagatgaatgaagac
actactcttgtcatatatggtatctcacgcgaggttaaagatgtgaaccctgaatttaga
tcttttgtgttcacgaagggctctttcactaaagaggtcaaggatgtgtgcatgctattt
gccgagtttcatcaaaatattgctttttatgagactcatttgaatcattggtgtaaagat
tttccataccttacgtttacaatagcgtccaattcgaccgatttcaatgcgctcacaccg
gaatgccagattattgaattaaatgactccgacagggctcagatgccgttggatccggag
acaaatgccgatgacactcctataggatttattatggatctccaggcgtctgaacaggtt
aaacaaccatgtatgactcttgattcttctggtccattgccaaggttcatcatcttatcc
cacaggggtcaactattgacttggaatatctggtatacgaaagctatcaaggcccaggaa
gatgacttatctgcggctttgagttgtgtattgaaggccccccaagaggtgaaattacca
acgcatacgcaagtgcaagcatcgtcaccggccatccaaaaagctaccaatttagatttt
ccaaaatctgatagcatattttccaagcatgaaatgggtaatccatttggctccacttct
aacccatttggatctggaaaggactgtgtggtgcccgagaatgtgacttctccactaata
aaaactgcccgttccccgaaattgcagggaaatatggatacgacctcatatttacatgag
aaacctgcacctaataatccccctaatgcttcccctgtctttggaaagtctggaattcaa
aacagtaccaggttctcgctgtccgcacgtgcaggttccgatgctcctaacattaaaaat
tcaaccaacagtggattttctgcctttgcttccaacggtagttctccatttggcgcattt
gccagcaaagatcaaacatcaccttttggtgtaattgccgctaaaggtgcacatacatca
ccctttggtgattcctttaagcttggggctcagaataagaagtcatcaatgcttgggttt
gggcagagcagcggtaaaatggacggtgacaattcggagtcaccattcaagtttaaggca
aaaagtgatgaagcatcacctatagtgaaattgctgtccagtaaggataagtctcaacct
gtatttggtatcaacacctcacacaaatctccatttgagaaattggccgagagttcaggt
aagtctacaggtaaggcgttcaactttgctggatttgctttatctatgtctgaaaaaaac
tcaaataatagaaatgaaccggatgaaagtgaagaagaaagcgacaatgataaggtggat
caggatgaatatgatagtgaattcgatttcgatagagatgatgagtctgataatgatacg
aaactgaacgaagagaggtacgcaccatttgtaccacttcaggaggagaaaattgaagac
agtacctctgttactgtcccagaagatgcggaaagaattcaagttgaaagggagattttt
aatcaacgagaaaaaatgaagaagacaacttctggtgaagattctgaactgaacggccta
gaggagaaggttgggaacagtttaccaggaacagagggggaacaacagggatccaaagaa
gccacagagaaatctgtgcaaactaaagaggaatttgaggaatccacaaagaaatcaacg
gaagacgatactaagggatttgaatttcctagtcatgaaaatgaattgatcaaaaaattc
aagcatccgactttggcgaacgatctcctttcatcgaggtatgctgatggcgaaagcgtg
cagacaaatcagttggaggaggaaaacaaagcggttgacataagacctgagtcagcggag
aaggatgaggtaaaaagtgaagatgagatgtcccaacttcgcaaagcctctggatcagaa
tatctgatccccatggcacaaacaaatttggaggatgataaggcggtagaaaaggaggag
aacagctcaaaaatggaaccgaattcatcagatgtagaggttgaaactgctgaagcgggt
tctagtgcttcttctgaagaaagttatgagaggatagataaaagagaggttgaagaacaa
gcagatcatatacaagaaatgaagcaaagtgaaaccactagtgatgcagcagtcgttcct
tcctctacggatgcatatctcacttcaggaacacgcgaagacaaggcggctactgaccaa
gctaaacttgttcgtcaagctacagacacgccctctttgctgaacacagaaaaagtggaa
acagagactatggaatataaggatgaaaagattgaagtgggaaaccagcattatgctgat
ttcaaagtggaatcatttgaagatgaggaggtttatctcagtaaattggcactccctcct
tcagttcctcctcttctcactgtgaaaatagtagaatatcccaatgaggacaagccagct
gtcgagaaagagatgctagaggtcgtttacgatacagagacagatctcgaattccttcaa
cgaaatatcaatcagttgaacttgttcttatcgaaacatatggacgacagcgtgatgcac
acacttgagaagtctatcgggttttccgacttctggcggttgaacgaggttggaactgtg
gaagcgggtattcaaaacactaccaaaacgctcactaatatgatggctcaactaagggat
gtgattactagggtgacaaaacttaatgaagaagtagcttcttgtatgagacggactcct
gcaataaaggagtcattactgatcgaacctcaagcagtcgtcattagtcgcaaaggagga
ttaacttttgattccatgcagagatgccataagatcaacctacttgtgaataaggtcaaa
tcgatggattctcagctacaatcgaaacttcttattctcaatagtttggtccaccccgaa
gcattgacagaacatcctcaaaacatggatatcgttatttctgccatggactcgcgattc
cagcagcttttggacggactttacgatatcaaaaaagaatacgatagtgtagctactatg
cgtcaatacaaggactctgacaatactatatcagacttatttgataaccccaagaacagc
ctcaaagcattcatcaagggtgacagaacggaaaacgaaacaattagggtttcatccatt
atatcggctgttggtagtaggagtcggctagggaagatgttccatgatagggcctttcac
cctaggaaggtgactttgtaa
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