KEGG   Brettanomyces nanus: FOA43_000421
Entry
FOA43_000421      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
bnn  Brettanomyces nanus
Pathway
bnn03022  Basal transcription factors
bnn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FOA43_000421
  09124 Replication and repair
   03420 Nucleotide excision repair
    FOA43_000421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bnn03021]
    FOA43_000421
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_000421
Transcription machinery [BR:bnn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FOA43_000421
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FOA43_000421
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 62193822
NCBI-ProteinID: XP_038776681
UniProt: A0A875RWB0
LinkDB
Position
1:904611..905669
AA seq 352 aa
MDAIADRAFVDVQSGKGNLHRVVDETPSLLIVILDVSPLEWKKLMDSGTLDFKNVVSALL
VMLNSHMALNSGNKVALYIANSYLHGAELVYPWFDDRDDSSDGSEQNSKRRRMNADNILK
ASGIYRQFRIVDESIVDKLDSLIKEEPSKLKSMVNKGNTHIKGTLSGALSQALSYINRLQ
KSDEHSGLKARVLCISVSGDSALPYVSIMNSIFAAQKMKISVDVCKLGPDSTFLQQASDA
TNGVYIHINNPDGLIQYLSTALFIDPLLRPIVVLPTNTSIDFRASCFITNKLVDVGYVCS
VCLCILSVIPDDERCPTCHSKFDHNLITRLKRKPKVLPLKMGNKRKKRVVDK
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggatgcaattgcagatagagcatttgtggatgtgcaaagtggtaaaggaaacctccac
agggttgtggatgagacaccttcccttctcatagtaattctcgatgttagtccattagag
tggaagaagttgatggattcaggcactttagatttcaaaaatgttgtgtctgctttactt
gtgatgctcaactctcatatggctttaaacagtggcaataaagttgctctatatatagcg
aacagctatttgcatggtgctgagttggtatatccatggtttgatgaccgggacgatagt
agtgacggtagcgaacagaatagtaagaggcgcagaatgaatgctgacaatatcttgaaa
gcttctggaatatacaggcagtttcgaatcgtcgatgagagtatcgtggataagttggat
agccttataaaagaggagccgagcaagttaaagagtatggtgaataaaggaaacacacat
atcaagggaactctatctggggctctttcacaggctttaagttacataaatcggctgcag
aaatcagacgagcattcaggtttaaaggcccgagtgctgtgtatcagtgtcagtggagac
tctgctcttccctacgtttctatcatgaactcgatatttgcagcacagaagatgaagatt
tctgttgatgtgtgtaagcttggacccgactcaacgttcttgcagcaggcctcggacgct
acaaatggcgtttatatacatattaacaatccggatgggttgattcagtatctttcgaca
gcactattcattgatccactgcttcgacccattgtggttctgcctacaaacacttccatt
gacttcagagcatcatgtttcattacgaataagttggttgacgtgggctacgtatgctct
gtgtgtttgtgtattttaagtgttatccctgacgatgaaaggtgtcctacatgtcattcc
aagttcgatcacaacttaataacgaggctaaagaggaagccaaaggttttgcctttaaaa
atgggtaataagaggaaaaagcgggtagtagataagtag

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