Brettanomyces nanus: FOA43_000421
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Entry
FOA43_000421 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bnn
Brettanomyces nanus
Pathway
bnn03022
Basal transcription factors
bnn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOA43_000421
09124 Replication and repair
03420 Nucleotide excision repair
FOA43_000421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_000421
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_000421
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOA43_000421
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOA43_000421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
62193822
NCBI-ProteinID:
XP_038776681
UniProt:
A0A875RWB0
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Position
1:904611..905669
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AA seq
352 aa
AA seq
DB search
MDAIADRAFVDVQSGKGNLHRVVDETPSLLIVILDVSPLEWKKLMDSGTLDFKNVVSALL
VMLNSHMALNSGNKVALYIANSYLHGAELVYPWFDDRDDSSDGSEQNSKRRRMNADNILK
ASGIYRQFRIVDESIVDKLDSLIKEEPSKLKSMVNKGNTHIKGTLSGALSQALSYINRLQ
KSDEHSGLKARVLCISVSGDSALPYVSIMNSIFAAQKMKISVDVCKLGPDSTFLQQASDA
TNGVYIHINNPDGLIQYLSTALFIDPLLRPIVVLPTNTSIDFRASCFITNKLVDVGYVCS
VCLCILSVIPDDERCPTCHSKFDHNLITRLKRKPKVLPLKMGNKRKKRVVDK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaattgcagatagagcatttgtggatgtgcaaagtggtaaaggaaacctccac
agggttgtggatgagacaccttcccttctcatagtaattctcgatgttagtccattagag
tggaagaagttgatggattcaggcactttagatttcaaaaatgttgtgtctgctttactt
gtgatgctcaactctcatatggctttaaacagtggcaataaagttgctctatatatagcg
aacagctatttgcatggtgctgagttggtatatccatggtttgatgaccgggacgatagt
agtgacggtagcgaacagaatagtaagaggcgcagaatgaatgctgacaatatcttgaaa
gcttctggaatatacaggcagtttcgaatcgtcgatgagagtatcgtggataagttggat
agccttataaaagaggagccgagcaagttaaagagtatggtgaataaaggaaacacacat
atcaagggaactctatctggggctctttcacaggctttaagttacataaatcggctgcag
aaatcagacgagcattcaggtttaaaggcccgagtgctgtgtatcagtgtcagtggagac
tctgctcttccctacgtttctatcatgaactcgatatttgcagcacagaagatgaagatt
tctgttgatgtgtgtaagcttggacccgactcaacgttcttgcagcaggcctcggacgct
acaaatggcgtttatatacatattaacaatccggatgggttgattcagtatctttcgaca
gcactattcattgatccactgcttcgacccattgtggttctgcctacaaacacttccatt
gacttcagagcatcatgtttcattacgaataagttggttgacgtgggctacgtatgctct
gtgtgtttgtgtattttaagtgttatccctgacgatgaaaggtgtcctacatgtcattcc
aagttcgatcacaacttaataacgaggctaaagaggaagccaaaggttttgcctttaaaa
atgggtaataagaggaaaaagcgggtagtagataagtag
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