Brettanomyces nanus: FOA43_000551
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Entry
FOA43_000551 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bnn
Brettanomyces nanus
Pathway
bnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOA43_000551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000551
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOA43_000551
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FOA43_000551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
SLAC1
Motif
Other DBs
NCBI-GeneID:
62193952
NCBI-ProteinID:
XP_038776808
UniProt:
A0A875RXG6
LinkDB
All DBs
Position
1:join(1195354..1195357,1195424..1197255)
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AA seq
611 aa
AA seq
DB search
MAQQIQPNQSQQSQSQQGQQQQGMSKILGVMGTPNSTATTVAAAAQVIAQQQQQKAAVAA
AAAAQTQGLPLSMMMSPQIQGRVIQHGNQGGQGVQGVQGVQGVQGSGTSGQQPQQLFQQV
QQQQIAALAAQRLAQVQAAQQQQQQIPFSQIQQLQQLQQQAQQAQQAQQAQQVQQVEAQQ
AQQPQAAAAAVGLGQIQPQPRLQPGIPYAQVGPQPMVREVWNNNLESEMMVIRELAERYN
TISVSTEFAGIASRPVGSFRSIKDYHYQTMRSNADLLNLVQVGITLSDNQGRRPAGVPST
WQFNFKFELDKEMFNRDSIDTLITTGINFSKLKESGIESSEFAQCLIDSGLCLLPDVTWV
SYHVGYDFGFLISLLINKEMPSSEEDFSDWVSTYFPNYYDVKLISVSKLFGNNVYKSRFT
LESLAEELGVIHNANLNFLQVGGQSMLTHMCYWELRRLIDSKELESCKNEIWGLSDNSDI
ADLAQEIQPQHQQPPPPAPQQSQQSQQSQQQQQQSQQSQQQRGQQPSQMPPQLQPLQMLL
QQKQQQQQQQSVQRIQQLLQAQSLLNQTTGTGVQRQGQQQPIFGMNAPPPGISTDQKNML
SPRMMYYNRPM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaatacagccaaaccagtctcagcaatcacaatcccaacaaggtcagcaa
caacaggggatgagcaagattctcggtgtgatgggaactccaaattcgactgctaccact
gtggcggccgcagcgcaggtaattgcgcagcaacaacaacagaaggcggcagtagcagca
gcagcagcagcacagacccaagggttgcctctttcgatgatgatgtcccctcaaattcag
ggcagggtcattcagcatgggaaccaaggcggtcagggtgttcaaggtgttcaaggtgtt
caaggtgttcaaggttctggcacttctggccagcagccacagcaactgtttcagcaagtt
cagcagcagcaaattgctgcactggcagcacagaggttggcccaagtgcaagccgcacaa
caacagcaacaacaaatacctttttctcagatacagcaacttcagcagttacaacaacag
gcacaacaggcacaacaggcccagcaagctcagcaggttcaacaagtagaagcgcaacag
gcacagcaaccacaagcagcagcagcagcagtgggccttggccaaattcaacctcaacca
cgattacagccagggataccttatgcgcaagtaggaccacaacctatggttcgtgaagtt
tggaacaataaccttgaaagtgagatgatggtcattagagagctagccgaaagatataat
acgatctccgtgtctactgagtttgcaggtatagcttcaagaccggttggctcgttcaga
tcaattaaggattaccattatcaaacaatgcgttcaaacgcggacttgttgaatttggtc
caggttggaatcaccctcagtgacaatcaaggaagaagaccagcaggagttccatcgact
tggcagttcaatttcaaatttgagctcgacaaagagatgtttaatcgagattctattgac
actcttataactacgggaatcaatttcagtaaactcaaggaaagtggaattgaatcttct
gagtttgcacaatgtcttatagacagtggcctttgcctcttgccagatgtgacatgggtc
agttatcacgttggctatgactttggctttttaatttctctgctaatcaataaggaaatg
ccttcgagtgaggaagacttttcagattgggtgtctacatattttcctaactattacgac
gtgaagctgatttctgtgtcaaagctttttggaaacaacgtgtataaaagtcgattcact
ttggaaagtcttgccgaggagcttggtgtgatccataatgcaaacttgaatttcttgcag
gtgggtggacagtccatgctcactcatatgtgctactgggagcttagaagacttatcgat
tccaaagaacttgagtcttgtaagaacgagatctggggcttaagcgataattctgacatt
gcggacttggctcaagagatacagccgcaacatcagcaaccaccaccaccagcaccacag
cagtcgcagcaatcacagcaatcacagcagcagcagcaacagtcacagcaatcacagcag
cagcgtgggcagcaaccgtcacaaatgcctcctcagctccaacctctacaaatgctttta
caacagaaacagcaacagcagcaacaacagtcagttcagcgaattcaacaactgcttcaa
gcacagagtctgttgaaccaaactacaggaacaggagtacagagacaaggccaacagcag
ccaatatttggtatgaatgccccacctccagggatttctacagaccaaaaaaatatgctg
tccccgagaatgatgtactacaataggcctatgtaa
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