Brettanomyces nanus: FOA43_000700
Help
Entry
FOA43_000700 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bnn
Brettanomyces nanus
Pathway
bnn03018
RNA degradation
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_000700
09123 Folding, sorting and degradation
03018 RNA degradation
FOA43_000700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000700
03041 Spliceosome [BR:
bnn03041
]
FOA43_000700
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOA43_000700
mRNA degradation factors
5'-3' decay
Lsm complex
FOA43_000700
Spliceosome [BR:
bnn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FOA43_000700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
AtMg01050
Motif
Other DBs
NCBI-GeneID:
62194101
NCBI-ProteinID:
XP_038776955
UniProt:
A0A875RNA2
LinkDB
All DBs
Position
1:1504989..1505396
Genome browser
AA seq
135 aa
AA seq
DB search
MSSQQTTSRPDSGRQQGLKGNTNGGHRKKDKFEGPKREAILKLENYINTEIIVTLSGGRE
VVGKLTGYDQLMNLVLENTVERLRDVNDRSKLSENTRNLGRVIIRGPLLLTISPREGFDM
IANPFIDEVSDQTVI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacaacaaaccacgagcagacctgattctggtcgtcagcaaggacttaaaggc
aataccaatgggggacataggaaaaaagacaagttcgagggacctaagagggaggccatt
cttaaactagagaactatatcaacacggagattatagtgacgttgtcgggtggaagagaa
gttgtgggaaagttaaccggctatgaccagttaatgaatcttgttttggaaaataccgtg
gaaagattaagagatgtcaacgatagatccaagctttctgagaacactcgtaacttaggt
agagttatcattagaggtcctttgctattgaccatttctccaagggagggctttgatatg
attgccaacccatttattgatgaagttagcgatcagactgttatctaa
DBGET
integrated database retrieval system