KEGG   Brettanomyces nanus: FOA43_000700
Entry
FOA43_000700      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
bnn  Brettanomyces nanus
Pathway
bnn03018  RNA degradation
bnn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOA43_000700
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FOA43_000700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bnn03019]
    FOA43_000700
   03041 Spliceosome [BR:bnn03041]
    FOA43_000700
Messenger RNA biogenesis [BR:bnn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FOA43_000700
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FOA43_000700
Spliceosome [BR:bnn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FOA43_000700
SSDB
Motif
Pfam: LSM AtMg01050
Other DBs
NCBI-GeneID: 62194101
NCBI-ProteinID: XP_038776955
UniProt: A0A875RNA2
LinkDB
Position
1:1504989..1505396
AA seq 135 aa
MSSQQTTSRPDSGRQQGLKGNTNGGHRKKDKFEGPKREAILKLENYINTEIIVTLSGGRE
VVGKLTGYDQLMNLVLENTVERLRDVNDRSKLSENTRNLGRVIIRGPLLLTISPREGFDM
IANPFIDEVSDQTVI
NT seq 408 nt   +upstreamnt  +downstreamnt
atgagctcacaacaaaccacgagcagacctgattctggtcgtcagcaaggacttaaaggc
aataccaatgggggacataggaaaaaagacaagttcgagggacctaagagggaggccatt
cttaaactagagaactatatcaacacggagattatagtgacgttgtcgggtggaagagaa
gttgtgggaaagttaaccggctatgaccagttaatgaatcttgttttggaaaataccgtg
gaaagattaagagatgtcaacgatagatccaagctttctgagaacactcgtaacttaggt
agagttatcattagaggtcctttgctattgaccatttctccaagggagggctttgatatg
attgccaacccatttattgatgaagttagcgatcagactgttatctaa

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