Brettanomyces nanus: FOA43_000725
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Entry
FOA43_000725 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
bnn
Brettanomyces nanus
Pathway
bnn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOA43_000725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_000725
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FOA43_000725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
HEAT_EF3_N
U3snoRNP10
HEAT
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
62194126
NCBI-ProteinID:
XP_038776980
UniProt:
A0A875RZF7
LinkDB
All DBs
Position
1:complement(1569489..1574813)
Genome browser
AA seq
1774 aa
AA seq
DB search
MSLADQLAHISQEAHDVALDRNRRSELHSISFLYDPHYAATQDYESIFAESLEALQKLQT
LDKRFSRFRDTIFSDLSVSIDRLTQTKEQNKNIDKTINVFLSLLAPYWHLAISVKAAEWP
LRRFSMNVYNSEFLLLTALPYFDQPIFERILYVIPKLPMIFQWLSGFKKAQRCPARTTIT
RSFSDIDFFNLYSKFINQEVAHHNQYRKQLVFFVVMTVSGLASLASSNSDHLADFISLSL
ESTSTLMVSKDQESCVSAFTILSAVSSAVPLSREVIMASIDTIILSFDGDLSIASFRCIL
KLYQNIQSDSLAPLRSSTVNGLPKELLSPGSDYLHLIRFTRYSNKFVTSYLRALIIAGKS
IESSVFDSLRFDFHFTKKQLQLLETDIITHVRDSSSGGQEFVSFLKFLIDQDKQQFLSVL
NQSKMSVENLEMLVQSTLLLVEDIEDLSQQDSGDSVTVSIDDETESDVDLLSLFEDHKTD
VATFLSSDSVINTSFHDLQSIYLRSIQVQSEGLFLDTSFKDVDQRISFLLRVASGSQIPI
RGRINSLGQLKKLIEGLDPTVFVYSILPVLCTLFLDPNPKMRSQAVDVLEVIHSRPKSNA
KRILLEHMYGSANVAMISPKDGSIFISKLLINKQLFKLDAESLLQSFHSIIGSKKLAQMV
LAFFASHTTIVDVPDIKAKLLKITSAGCLSLKGASSPSELFSDLLSSYLKERSQWKEKCE
VTSSDFDVFELQIIELVREKENNLSALTLLEEALVSPFEHLASVSQHRLVQIFPTLKFEH
QIRIISYLLEDGLKDDSAVKYDPLELLENLQLSDAIFVQLLKGSVVGTSSSQPQNNVPKR
RRRSSASARQAMKETEVSSLANLHLRKVTILLDLLFFFSSKQTFKPSLDLLKFLFTILDD
LETLSMDGKLPVLYSQETLASCMLNVINTMKESQLSIDNTSAIRADIIVSSIRSSDSPQV
QNKLLLVIAALASLSPELVLHSVMPIFTFMGAHTIRQDDEFSTHVVEETILCVVPALAST
AKSGMAEEVDFLLTSFVGAFPHIPRHRRVRLFTTLARTLSSQLSVYLILFLCGQQYANAY
AKHKMANCSALTDFSSIFLQSFTPEEQLDAARRYLALWKDLPEDVVEKGSKTFGELTSRV
IFGPSIVAMNKSELYNLRKGLLSYLRHSLVDFKSTSDIPKLRLKITSEFLQNGSSEENLS
VFSGLIKDVLGLADEYSNSFEDEEILKKFYKLLGDILSLLPIQYFVKSISSILIAPSASM
RTKQHVANLASAKFELEHIDNTYAQEGISILTPILLDAIISCENVELSQACFDTLASFFQ
RFHDRLESELLLRSLDVAVGESGLLSKSGPELTIAAINCVTSVVTVAGVKIIGYFPKIIS
SLYKIFETTTDAADGSDEEESARLIQISILVLFSAMMRKIPNFLTPNVQDFTDITFRAKL
VPDSIRNTVLATMVNSVDSKTVLSALCKLWSKVSDLDAATIGLFLSTLDLEVDKLDKKTA
ITESSMFTRFFLNALEFQGTSKFDINTVNRIESSISKCGIQYVLKLNDKNFRPLFASIVR
WAFDGEGVVTSINEIERLQSFFKFFNKLQEQLRSIITTYFSYLLDSTESLLDRFSKGSID
NILLKRLVFISLTSSFKYDQSEYWQTSTRFTPISKCLCDQLTNVEDTIGKHLVKALTALV
QTASSEEHNKQVNDLLMSHMKAECKPKEKFWTVRTLKNIYKKMGENWLSLLPQLVPLIAE
LLEDDDEEVEMEVRTGLAKVIEDVMGEPLDRYLQ
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagcagatcagttggcacatatatctcaagaagctcatgatgttgcgttggac
agaaatagaagatccgagcttcattcgatctcattcctatatgatccacattatgctgct
acgcaggattatgaatcaatctttgcggagtctttggaagcccttcagaaattgcagaca
cttgataagagattctctagatttagggatactattttcagtgacttgtctgtgagcatt
gatcggctgacccaaacaaaggaacaaaataagaatatagataagaccatcaatgtgttt
ttatcgctccttgcaccctactggcatctcgctatttcagttaaggctgcagaatggcct
ttgagacgttttagcatgaatgtatacaattcggagtttttgcttttgactgctttacct
tattttgatcagccaatctttgaaagaattctttatgtgattccgaagctaccaatgata
tttcaatggctttccggcttcaaaaaagcccaaaggtgtcctgccagaaccacaatcaca
aggtcattcagcgacattgatttcttcaatctttattcaaagttcatcaaccaggaggtg
gcccatcacaaccaatacagaaagcaacttgtttttttcgttgtcatgactgtgtccggt
ttggcttcgctagcttcgagtaattctgatcatctagctgattttatttctttgtctttg
gagtccactagtactttaatggtctctaaggatcaggagagctgtgtcagtgctttcact
atattgtcggcggtgtcttctgcagttcccttgtcaagagaagttatcatggcctcaata
gacacaattatattatcttttgacggagatctttccattgcctccttccgctgcatcctc
aaattgtatcagaatatccagtcagattcactagctccacttcggtcatccactgttaat
ggacttcctaaagagcttctctcgcctggttcagactatttacacttgattaggttcacc
cgttacagcaacaagtttgttacctcctatttacgggccttaattattgctgggaagagt
attgaatcttctgtgtttgactcgttgagattcgacttccacttcaccaaaaagcaacta
caattgttggaaaccgatatcattacgcatgtgcgggattcttccagtggcggacaggaa
ttcgtgtcttttttgaagtttttaatagatcaggataagcaacagttcttgtcagtcctc
aatcagtccaaaatgtcggttgagaatttggagatgctggttcaatccactcttctcctg
gtggaagacattgaagacctaagccagcaggatagcggagatagtgttacggtcagcata
gatgatgaaactgagtctgatgtggacctacttagcctatttgaggatcataagaccgat
gttgccactttcttatcatctgatagcgtaattaatacttcgttccatgatttacaaagc
atttaccttagatccattcaagtccaatccgaaggcttgtttttggatacatccttcaaa
gatgtcgatcagcgtatttcattcttgctccgtgtcgcttctggatctcagatcccgatt
aggggaagaatcaactctttaggacagctcaagaaattgattgagggcttggacccgact
gtttttgtttactcgattttgcctgtcttatgtacccttttcttggatcctaaccctaag
atgagatctcaagctgtcgatgttcttgaggttatacactccagaccgaaatcgaatgct
aagagaatactactcgaacatatgtatggttctgctaacgtggccatgatctccccaaag
gacggctccatttttatctccaaattgctgattaataagcagctattcaagttggatgcg
gaatcattgcttcaatccttccacagtataataggtagtaagaagttagctcaaatggtt
ttggccttttttgcatcgcataccactatagttgacgtgcctgatatcaaggccaaattg
ctcaagatcacttccgcgggttgtttatctcttaaaggtgcttccagtccttctgaattg
ttttcagatttgctgtccagctatctaaaggaaagatctcaatggaaagaaaagtgtgaa
gtaacttcgtctgactttgatgtctttgaattgcagattatagaactggtgcgtgaaaag
gaaaataatctgtcagcccttactcttcttgaagaagctttggtttctccatttgaacat
ttggcatctgtatctcagcacaggcttgttcagattttccctacattgaaattcgagcac
caaatacgaattatcagctatctattagaggatggcttgaaggatgattctgctgtgaaa
tacgaccctctagagttgcttgaaaatcttcagttgtcagatgctatatttgttcagttg
ctaaaaggatctgtcgtgggcacgtcttcatcacagccgcagaataatgtaccaaagaga
agaagaaggtcctccgcttcagctagacaggctatgaaggagacggaggtttccagcttg
gctaacctacacttgaggaaagttactattcttttggaccttctatttttcttcagctcc
aagcaaacctttaagccttctctcgacttgttgaagtttcttttcaccatcttggatgat
cttgaaactttgagtatggacggaaagcttccagttctatactcacaggaaactttggct
tcgtgtatgttgaatgttatcaataccatgaaggaatcacaactatctattgataatacc
tctgctattagggcggacattattgtgtcctctattagatcgtccgattctccacaggtg
cagaacaagttactcctagtgatcgctgccttggcatctctctctcctgaattagttctt
cactccgttatgccgatcttcacgtttatgggggcacacaccattaggcaggatgatgag
ttttctactcatgtggtagaagaaaccatcctttgcgtcgtgcctgccttggctagtact
gcgaagagcggaatggcagaagaagttgactttttgttaacttcatttgttggtgccttc
cctcatattcctagacacagaagagttagactattcaccaccttggcaagaactttaagt
agtcaactatctgtttatttaattttgtttttgtgcggccagcagtacgctaatgcttac
gccaagcataagatggccaattgcagtgctttgactgacttttcgtctattttcttgcag
agctttacgccagaagagcaattggatgccgctcgaagatatttggcattgtggaaggat
cttcctgaagatgtggttgaaaaaggttctaagacatttggtgaattgacttctagagtt
attttcggcccctcgattgtggctatgaacaagtcggagctttacaacctcagaaaaggt
cttctcagctatttgaggcattctctcgtcgattttaagagtactagtgatatcccaaaa
ttgagactaaagatcacttctgaatttttacaaaatggaagctcggaggagaacttgtca
gtattttctggcctaatcaaagacgttttgggattagccgatgaatacagtaacagtttt
gaggatgaagagattcttaaaaagttttacaagctattgggagacattttaagtttgctg
cctattcagtactttgtgaagtcgatttctagtattcttatagctccgtctgcttctatg
agaacgaagcagcatgtggctaatcttgcgtcagccaagttcgaacttgagcatattgac
aacacttatgctcaagaaggtatttccatcttgactccaatattacttgatgctatcatt
tcttgtgaaaacgttgagctttcacaagcctgttttgataccttggctagctttttccag
agatttcacgatcgtcttgaatctgaattgctgctaaggtctttggatgtggcagttggg
gaatctggtttacttagtaagtccggtccagaattgacaattgctgcaatcaattgtgtt
actagtgtcgtgaccgttgctggagtaaagatcattggatacttcccaaagattatttct
tcactttacaagatttttgagaccaccactgatgctgcggatggtagtgatgaagaagag
tctgccagattgattcaaatctcaatcttggtattattctcagctatgatgagaaagatc
cccaactttttgacaccaaatgttcaagacttcactgatattacattcagggcaaagttg
gttccagattccattagaaatactgttttggcaaccatggtaaacagtgttgattcaaag
acagttctctcagcattgtgtaagttgtggtctaaggtgtccgatttggatgctgcaacg
attggtctcttcttatcaactttagatcttgaggtggacaagctagacaagaaaactgct
atcactgaatctagtatgtttactagatttttcttgaatgccttagagtttcagggcact
tcaaagtttgatatcaatactgtcaatagaattgaatctagtatttcaaaatgcggcatt
cagtatgtgctgaaattgaacgataagaattttagacctttgtttgcttccatcgtcagg
tgggcttttgatggtgaaggtgtcgtcacgtctattaatgagatcgaacgacttcaatca
tttttcaagtttttcaacaagcttcaagagcagttgcgttcaattatcaccacctacttc
tcctatttgcttgattccacagagtcgttactcgataggttcagcaaaggctctattgat
aacattctcttaaaaagattagttttcatttccttaacatcgtcgttcaaatatgatcag
agtgagtactggcagacaagcacaagattcactccaatatccaaatgtttgtgcgatcag
ttgaccaatgtggaagataccattggtaagcacttggtgaaggctttgacggcattggtt
cagactgcctcttctgaagaacataacaagcaagtgaacgatcttttgatgtcgcatatg
aaggctgagtgtaagccaaaggagaaattctggacggtgagaaccctaaagaacatctac
aagaagatgggagaaaattggttgagtttgcttcctcagttggttccgttgattgcggaa
cttttagaggatgatgatgaagaagttgaaatggaggttagaacaggattagccaaggtt
attgaagacgttatgggcgaacccttagatagatatctacagtaa
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integrated database retrieval system