Brettanomyces nanus: FOA43_000776
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Entry
FOA43_000776 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
bnn
Brettanomyces nanus
Pathway
bnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FOA43_000776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_000776
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FOA43_000776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Rad17
AAA_27
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
62194177
NCBI-ProteinID:
XP_038777030
UniProt:
A0A875RZK4
LinkDB
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Position
1:complement(1684498..1687383)
Genome browser
AA seq
961 aa
AA seq
DB search
MSSVRPELKFSDDTDQRSFYYKYYRLPEKSQRTLRVADKGDYYSVFDQDAEFVAELIYKT
QSVVKNSSIKISGVEKKTIQYLTLSPAVFASLVKIVVIDMGYKLEIYDKDWSSFRMASPG
NLSEIDELINTSELSSVSIIAALKLVNSSHQGKKIGLSYYDPNSKIIGLSEFLDNELYSN
LESILIQLGVKECLVPDNAASKDTEFEKVKQVIDRCGMVISEFKSSEFNVRNIEQDLVTL
TGDEHVLSTNEMSSLETSQACANALLSYLSLLADDANRGSITISKYNLEQFMKLDYAAVR
ALNLFPPPNFSNSMNKTSSLFGLLNNCKTAGGTRLLSQWIKQPLVDINDINKRHLLVKYF
FDDMSLRTNIQKDFLSDVPDITKLLKKISAKKNRMTRLDDVIRLYQMCLKLPVCNELLMG
SLDSIMSDNQDEAQTTKELVQSIWIKPISEYAKILQTYQAMIEQTIDLSSLEDATSAGAM
SNSMLSINPEYDENLLILSEKLNKVKKSMKNIHQDTGEELGMELDRKLKLEDHRIHGWCF
RLTRNDASCIRGNRQFQELSTVKAGVFFTTVELSRVSKEFESLKEAYESCQREIVDEVVT
TAATYIPVFTKLSVAVSSLDVLVSFSHAAAFAPTEYVRPRKMYGISDESRIMDLKEARHP
CLEQQENMMFIANDIYLEKDKDEFLIITGPNMGGKSTYIRTVGVIALMNQIGCFIPVNSD
SEICVMDSILARVGASDSQLKGVSTFMSEMLEMSSILKTATSNSLIIVDELGRGTSTYDG
FGLAWSISEYISTKIHAFTMFATHFHELTTLADKVQTIKNLHVVAHVEDVSDAAIRGSND
NITLLYKVEPGVSDQSFGIHVAEVVKFPSKIILMSKRKALELDDSKDGEASKRSHFSDDD
VLKGKKDLKAVLKTWKRNVEKMGGIQKLTSDEVVAELRKLVKEDYKDAFQNNPLLKDILA
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgttcgtcctgaattgaagttctctgatgatacagatcagagatcattctac
tacaaatattacagacttccagaaaagtcgcagagaaccctgagggtagccgataaaggg
gattactactcagtgtttgatcaagatgctgaatttgttgctgagctcatttacaagaca
cagtcagttgtcaagaattcatccatcaaaatctccggagtggaaaagaaaacgatccaa
tatttgaccttatcacctgctgtttttgccagtttagtcaagattgttgtcattgatatg
ggatataagcttgaaatatacgataaggattggtctagtttcagaatggcctctccggga
aatttgtccgagattgatgaattgataaacacttcagagttgagttctgtttctatcatt
gccgccttgaaactagtcaactcttctcatcagggaaagaaaatcggccttagttattac
gatcctaacagtaagattatcggattgtctgagttcctagataacgaactctattcaaac
ttggagtccattttaattcaattgggtgtcaaagaatgcctagttcctgacaatgcagcc
tctaaagataccgagtttgagaaggtcaagcaagtcattgatcgttgtggtatggtaatc
tccgagttcaagtcttcagaatttaatgtcagaaatatagagcaggatttggtaacactt
actggggatgagcacgttctttcgaccaatgagatgtccagtttggagacttcgcaggcc
tgtgccaatgccttactgtcatatctctctttgcttgcagatgatgctaacagagggtcg
atcaccatttcaaaatacaatcttgagcaattcatgaagttggattatgccgctgttcgt
gccttgaatttgtttccgcctcctaatttcagcaattccatgaacaagacctcgtcattg
tttggcctcttgaacaattgtaagaccgcaggcggtactagattgctttcacaatggata
aagcagcctctagtcgatataaatgatatcaataagcgtcatttgttggttaaatacttc
tttgatgacatgagtcttcgtaccaatattcagaaggactttttaagtgatgttcccgat
atcaccaagcttcttaagaaaatcagtgccaagaaaaatcgaatgactcgtttagatgat
gttattcgtctttatcagatgtgtctaaagttgcctgtttgtaacgaattgttgatgggt
tccctcgattccatcatgagtgacaatcaagacgaggcgcaaacaaccaaagagttggtt
cagtcaatctggatcaaacctatttccgagtacgcaaagatacttcagacttatcaagca
atgattgagcaaacaatcgacctttcatctcttgaggatgctacgtctgcaggcgccatg
tctaactctatgctttccattaatcccgaatacgatgagaatttattgatactaagtgag
aaattgaataaagtcaaaaagtcgatgaagaacattcaccaagataccggtgaagagttg
ggcatggaattggatcgtaagttgaaacttgaagaccatcgtattcatggatggtgcttt
agactcacccgtaatgatgcttcttgcatcagaggtaatcgtcaattccaggagttgagc
acagtgaaggcaggtgtatttttcactaccgttgaactaagccgagtcagtaaagaattc
gaaagccttaaagaagcatacgagtcttgccagcgtgagatcgtcgatgaagtggtcact
acagcagcaacgtacattccagtgtttacgaaactttccgtggccgtttccagtttagat
gttttggtttcattcagccatgccgcagcatttgctcctacagagtatgtgcggcctagg
aagatgtatggaatcagcgacgagtctagaattatggacttgaaagaggccagacatcct
tgtttagagcaacaagaaaatatgatgtttatcgccaatgatatttacctggagaaggac
aaagatgaatttttgatcattacaggccccaacatggggggtaaatccacctacataaga
accgtgggagtgatcgctttgatgaaccagattggctgttttattcctgtcaacagtgat
tcagagatatgcgttatggactctatattggctcgtgtcggtgcctccgattcccagttg
aagggagtgtctacatttatgtctgagatgcttgagatgtcgtctatccttaagactgct
acatcgaactcgcttattattgtggacgagttaggccgtggtacttctacgtacgatggc
tttggattggcttggtcgatatctgagtacatttcaacaaaaattcacgcatttaccatg
tttgcaactcattttcatgaactcactacattagcagacaaagtacaaaccataaaaaat
cttcatgtagtggcccatgtggaagacgttagcgatgctgccattagaggatccaatgat
aacatcaccttactatacaaggtggagccgggagtctcagaccaatcatttggtatccat
gttgccgaagtcgtcaaatttccaagtaaaatcattcttatgtcaaagaggaaagccctc
gaacttgatgactccaaggatggagaggctagcaagcgctcacatttctccgatgacgac
gttttgaaaggaaagaaagacctaaaagctgtattgaaaacatggaagagaaacgtagaa
aaaatgggaggcatacagaagttgacgagcgacgaggttgtcgcagagctcagaaagctt
gtcaaagaggattataaggacgcatttcagaacaatcctcttctcaaggatattctagca
ttataa
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