KEGG   Brettanomyces nanus: FOA43_000819
Entry
FOA43_000819      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K12590  exosome complex component RRP46
Organism
bnn  Brettanomyces nanus
Pathway
bnn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FOA43_000819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bnn03019]
    FOA43_000819
Messenger RNA biogenesis [BR:bnn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     FOA43_000819
SSDB
Motif
Pfam: RNase_PH DUF6428 EPS8_2nd
Other DBs
NCBI-GeneID: 62194220
NCBI-ProteinID: XP_038777073
UniProt: A0A875RXW9
LinkDB
Position
1:1773373..1774038
AA seq 221 aa
MSFQTEIGLLDQVDGSSTFEFATTKVITSVAGPLEITRMKNEKPTEAFLDISIKPATDVS
STRESFLVTKLAKVLQKTIDMDKYARREIQIMVQLLSPGESEEYTVKELTAIVNSVYLSL
LNGGISLRTSFWATCCVIDGNGEILMRPTNKQLRQSVSHHIAVFSIKDGKSDALIFSDSK
GSFSENELLKVLDRCCDDIDSFNSKVKKVVLDRVKRDYIWS
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtcatttcaaactgaaatcggattgcttgatcaagtagatggttcatctacctttgaa
tttgccacaactaaggtgattacgtcggtggccggaccgttggagattacacgaatgaaa
aacgaaaagcctacagaggcatttcttgatatcagtataaagccagcaacggatgtctcg
tccacaagagagtcatttttagtaacgaaattggccaaagttcttcagaagaccattgat
atggataaatatgctcgtcgagagattcagattatggttcaattactgagcccaggtgaa
agtgaggaatatacagttaaggaacttacagctatagtgaattcggtttatctttctttg
ctaaacggcggaatttcgcttaggacatctttttgggctacttgctgtgtgatagacggc
aatggtgaaatattaatgagacctacaaataagcaactcagacaatccgtgtcgcaccac
atagctgttttcagcatcaaggatggaaaaagcgatgctcttatatttagcgattccaaa
gggtctttcagcgaaaatgagcttttgaaggttcttgatagatgctgtgatgatatagat
agcttcaacagtaaagtgaaaaaggtggtattagatagagtgaaaagggactatatatgg
agctaa

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