Brettanomyces nanus: FOA43_000819
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Entry
FOA43_000819 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12590
exosome complex component RRP46
Organism
bnn
Brettanomyces nanus
Pathway
bnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOA43_000819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000819
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FOA43_000819
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
DUF6428
EPS8_2nd
Motif
Other DBs
NCBI-GeneID:
62194220
NCBI-ProteinID:
XP_038777073
UniProt:
A0A875RXW9
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Position
1:1773373..1774038
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AA seq
221 aa
AA seq
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MSFQTEIGLLDQVDGSSTFEFATTKVITSVAGPLEITRMKNEKPTEAFLDISIKPATDVS
STRESFLVTKLAKVLQKTIDMDKYARREIQIMVQLLSPGESEEYTVKELTAIVNSVYLSL
LNGGISLRTSFWATCCVIDGNGEILMRPTNKQLRQSVSHHIAVFSIKDGKSDALIFSDSK
GSFSENELLKVLDRCCDDIDSFNSKVKKVVLDRVKRDYIWS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcaaactgaaatcggattgcttgatcaagtagatggttcatctacctttgaa
tttgccacaactaaggtgattacgtcggtggccggaccgttggagattacacgaatgaaa
aacgaaaagcctacagaggcatttcttgatatcagtataaagccagcaacggatgtctcg
tccacaagagagtcatttttagtaacgaaattggccaaagttcttcagaagaccattgat
atggataaatatgctcgtcgagagattcagattatggttcaattactgagcccaggtgaa
agtgaggaatatacagttaaggaacttacagctatagtgaattcggtttatctttctttg
ctaaacggcggaatttcgcttaggacatctttttgggctacttgctgtgtgatagacggc
aatggtgaaatattaatgagacctacaaataagcaactcagacaatccgtgtcgcaccac
atagctgttttcagcatcaaggatggaaaaagcgatgctcttatatttagcgattccaaa
gggtctttcagcgaaaatgagcttttgaaggttcttgatagatgctgtgatgatatagat
agcttcaacagtaaagtgaaaaaggtggtattagatagagtgaaaagggactatatatgg
agctaa
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