Brettanomyces nanus: FOA43_000895 Help Entry FOA43_000895      CDS       T07002                                  Name (RefSeq) uncharacterized protein   KO K12879   THO complex subunit 2 Organism bnn  Brettanomyces nanus Pathway bnn03013   Nucleocytoplasmic transport bnn03040   Spliceosome Brite KEGG Orthology (KO) [BR:bnn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     FOA43_000895   09122 Translation    03013 Nucleocytoplasmic transport     FOA43_000895  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bnn03019]     FOA43_000895    03041 Spliceosome [BR:bnn03041]     FOA43_000895 Messenger RNA biogenesis [BR:bnn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      FOA43_000895 Spliceosome [BR:bnn03041]  Complex C   Other components    EJC/TREX     FOA43_000895  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     FOA43_000895 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 DUF7318 Motif Other DBs NCBI-GeneID:  62194296 NCBI-ProteinID:  XP_038777148 UniProt:  A0A875RYA4 LinkDB All DBs Position 1:1932955..1937412 Genome browser AA seq 1485 aa AA seqDB search MSVESHAMVPFNWNYLTEDSIKDMASTQQELVDKIGKDKSLLDDVFYEIVLSLTERAEEI SSDTLVELTDAILAGFVNVGEKIEASIEFLLIFQAINPSEKLIPFIEAVNISSELKNEYL DPSVLRHSLFPDYNRLYYLDARISNYGLEVYSSLGESSEGYSKFIAEAASFFHEYGDVDG LPLLTKNLDVLIGHFKLDMNRCFLLLLSIMGTSVTEKLALVDSAIDRISFWHADETNTAI QSTLVSYLSDATKITPGEMAVIALLVKKNIIDFDIIFNSLSPRDFTLDANYVLITKDNSV LKILHKKFNEELQEEALKSTASALAMAAPLIKDEDDDGERRISSHRVVSETAVTKASLSY TPSKSSVKEDLEQMPKIRFFSYALKYRMYENSIFILTQYPFLPEINDRISDLINEFMEFL LDPYYMKLTKSVKNTRLLGHTDCDPLITDTASLFRVCNELVKFNGIKIARSPILLMKLTR IMSQSLANHEDKDLWLQFYRRFIFPALNFVNNMASVNEIFSAVKGYFPIQARYNLYGEYQ VVTAKNNPILKLNYGRTTKRMKDLLKRLSTENLSTSMRKFTKIVYSNPLAATDAFVSHIE SYNSLTDLVVDSSRMLNDYSWEVLTYQILNKLTGSRTAVQEDGLNYSSWFLNLSEFIGRL AQKYPESFQLEPILTLIVKSMNGGFTETALIFKEIVQSMTGIKQINNLNSRQILMLNSEE SIKKLAYDVIEDRRFKQHTTGKMLINLLVSSDFLNEMFILLCNLPTKIIEESHAPLKILN RKCDEIYSLVQTFIAAIDENINSKVFTHYMLSMEVLIGDYHVEPAWAFRIWRRHWSRAIK LQQICGDEVVVMSEFNRSLPKLLPHIKWDMISPQFYSTFWQLSLYEIDFPRISYSNQLAD VKTRIAADRRKLSNKRELNKKEEKRLNDEVQLLQEVIGQVDDDASKHERNFELVKKRLTG EKDLWFTDIDESNAEERIKQILEYCILPRMIHSSFDASFVAEFIFTIHRMCTRGYSLMSL LDKLFTGGFLGTMLFTSTSTETENIAIFYEEVLSKVNEYRKSKEKYESLHVKNENEMDVD EDKNGFEEFRKTLFKWHSKLLEDLISTLDSNHYTARNNGIIFAKGLLSSFPVIEEQGEIL KEKMSLIAMTETREDIKLSCNALYGLVVSKQHQMIPSWEFYAMDETMKQDLMKKKHERLE AEKQKHEEENKTRREKERKEEEELRAKRAIEAKESIERAKKDAEKSLVKPYGLVGLAPRK TETKAVSAVSARASTPSGPSSRSSTPHLLVPKSATPPKGPTPVSATDEATAADVPIAASI TKAKPSSSVITPSKTAANPGSISHEPPRGPSMKATDNSRELLRSRIEEEKRINRMRSAKM IPREPRGTRSNRMQKSPLPPPSIPPVKRDEQAPLPPPPMPPPLSMQPLGPRESRERDRQY RDRHDHHDRRDYHDHRDYRDQSSRKRASTDDDIDDRTKRARYSRR NT seq 4458 nt NT seq  +upstreamnt  +downstreamnt atgtccgtcgagtctcacgctatggttccattcaattggaactatcttactgaggattcc attaaagatatggcatcgactcagcaggagctcgtagacaaaatcggcaaggacaagtct ttattagatgatgtcttttatgaaatcgtattgtcgttgacggaacgtgccgaagagatt tcatccgatactctggttgagctaacagatgccattctagctggttttgtgaatgttggt gagaagatagaagcttccatcgaatttttactgatattccaggccataaatccaagtgaa aagttgattcccttcatagaggctgtaaatatcagttcagaattaaagaatgaatactta gatccgagtgtactaagacacagcttgtttccagactataatagattatactatttggat gccagaattagcaattatggtcttgaggtgtattcctctttgggtgaaagcagtgaaggt tattcaaagttcattgccgaggctgcttcatttttccatgaatatggtgatgtcgatggc cttcccttgctcacaaagaacttggatgttctaataggacatttcaaattggatatgaat agatgctttcttcttttactaagtattatgggcacttcagtcactgaaaagctggccctc gttgacagtgctatagacaggatatcgttctggcatgctgatgaaactaacaccgcaatt caatctacattagtttcatacctcagtgatgctaccaagataacacccggtgagatggct gtgatcgcattacttgtcaaaaagaatattattgattttgatatcatcttcaactcgctt tcacctcgcgactttacacttgatgccaattacgtgttgattacaaaggataactctgta ttgaaaattctccataagaagttcaatgaggagttgcaagaagaggctttgaaatccact gcatcagcattggcaatggccgcccctttaatcaaagatgaggatgacgatggtgaaaga aggatttcctctcacagagtcgtatcagaaaccgccgttactaaagcttctttgtcttat actccgtcgaaaagctctgtgaaagaggacttggagcaaatgcccaaaattcggtttttc tcctatgcccttaagtaccggatgtatgagaactctatattcatattgacccagtatccg tttcttccggagatcaacgatcgaatttctgatttaatcaatgagtttatggaattcctt ttggatccgtactacatgaaactaaccaaatctgtgaaaaatactcggttgttaggacat acggattgtgaccctctgattactgatacggcatctcttttcagagtctgcaatgagttg gttaaatttaatggcatcaaaattgctcgaagcccaattctactgatgaaattgaccaga attatgtcacagagtctagccaatcatgaagataaagacctatggcttcagttctaccgt cgttttatatttccagctctaaatttcgtgaacaatatggctagtgttaacgagatattt tctgctgtcaaaggatatttccccattcaagcacgatacaacttgtatggagaataccaa gttgtgacggccaagaacaatcccatattaaaactgaattacggacgaaccactaagaga atgaaagatcttctgaaacggctatcaactgaaaatttaagcacttccatgagaaaattc accaagattgtttattctaatccattggctgctactgatgcatttgtaagtcacattgag agttacaatagcttgactgatttggtggtggactcatcacgtatgcttaatgactattcg tgggaagtccttacatatcagatattgaacaagcttacaggaagcagaacagccgtacaa gaagatggtcttaactacagttcgtggtttctgaacttgtcggagtttataggaagattg gcccagaagtaccctgaaagttttcaattggagcctattcttaccttaatcgtcaagagt atgaatggcggttttacagaaaccgcacttattttcaaagagattgtgcagtcgatgaca ggtattaaacagatcaacaacttgaattcacggcagatcttgatgcttaatagtgaagag agcattaagaagttggcatatgatgtgattgaagatcgaagattcaaacaacataccaca ggaaagatgctaatcaacttgttggtgtcttcggatttcttaaatgaaatgtttattctt ttgtgcaacttgcccacaaagatcatagaggagtcgcatgctccactcaagatcttgaac agaaagtgtgacgaaatttattccttagttcagactttcattgccgccattgacgagaac ataaattccaaagtgtttactcattatatgctttctatggaggttcttattggggattat catgtggagccagcatgggctttccggatttggaggaggcattggagtagggcaatcaag cttcaacagatatgcggagacgaagttgttgttatgagtgaattcaacaggagtctcccc aagcttctaccacatattaaatgggacatgatatctccccaattttactcgactttctgg caattgtctctttatgagattgatttccctcgtatctcgtattccaatcaactggctgat gtcaagaccagaattgctgctgataggagaaaacttagtaataagagggagttgaataaa aaggaagaaaagaggctcaacgacgaagtacagttgcttcaagaggttatcggtcaggtc gacgatgatgcatctaagcatgagaggaactttgagttggtgaagaagagattgacagga gagaaggatttgtggtttacagatattgacgagagcaatgcagaagaacggattaaacag attcttgaatattgcattcttccaaggatgatccattcctcttttgatgcgtcatttgtg gctgaatttatattcactattcacagaatgtgcacaaggggatactctttgatgtcattg ttggacaagttatttactggaggatttttgggaaccatgttgttcacaagcacttctact gaaactgaaaacattgcaattttttatgaagaagttctttccaaggtgaatgaatatagg aagagtaaggaaaaatatgagagtttacatgttaagaatgaaaacgaaatggatgttgat gaggataaaaacgggtttgaagaatttagaaagacgctatttaaatggcattctaaacta ttggaagatttgattagcactcttgactctaatcattacactgcacggaacaacggaatt attttcgccaaaggattactatcgagcttcccagttattgaggagcagggagaaatcctt aaggagaagatgtcgttgattgctatgactgagactagagaggatattaaactatcgtgt aacgcattatatggattggttgtatcgaaacaacaccagatgataccttcatgggagttt tatgctatggatgaaacgatgaaacaggatctgatgaagaagaagcatgagagactagaa gcagagaagcagaaacacgaagaggagaataagacaagaagagaaaaagagaggaaagaa gaggaagaattgcgtgctaagagggccatagaagccaaagaatcgatagaaagagcaaag aaagatgctgaaaaaagtctggtgaaaccgtatggactagttggattggcgccaagaaag acggaaaccaaagctgtttctgctgtttctgcacgtgcttcgactccttccggaccttca tccaggagtagcacccctcatttgttggtccctaagtctgccactccacctaaagggcca actccggtcagtgctactgatgaggcaactgctgctgatgtaccaatcgctgcatctata accaaggctaagccttcttcttcagtgataacaccgagtaaaactgctgctaaccccggt agcatctctcacgagccgcctcgtggtccttcgatgaaagcaacagataactctcgagaa ctactacgttcgagaatagaagaagagaaacgcataaaccgtatgagaagtgctaaaatg atccctcgagagcctagaggtacgaggagtaatcgaatgcaaaagtccccattacctccc ccttcgattcctccagtcaaaagagacgagcaagcacctctcccaccacctccaatgcct cctcctttgtccatgcagccgttgggaccaagagaatcaagagaacgggatcgtcagtat cgtgaccgtcatgatcaccatgaccgtcgtgattaccacgatcaccgcgattatcgtgac cagtcgtccagaaagcgtgcttctactgatgacgacatagatgatagaactaagcgagcc agatactcgcgtcgctga

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