Brettanomyces nanus: FOA43_001049
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Entry
FOA43_001049 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
bnn
Brettanomyces nanus
Pathway
bnn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOA43_001049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_001049
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
FOA43_001049
Prokaryotic type
Archaeal type
TFE
FOA43_001049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_IS1595
Zn_ribbon_4
DUF6843
Motif
Other DBs
NCBI-GeneID:
62194450
NCBI-ProteinID:
XP_038777301
UniProt:
A0A875RXF4
LinkDB
All DBs
Position
1:complement(2272251..2273939)
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AA seq
562 aa
AA seq
DB search
MDAHRKAVEKEVYHLLRLVVRSFYPHQCVLIVEALIFHSVLYEDDLLKLTCMHKKVFRSF
CNRLVEDRLIIAYTQKEEAANQTGGYYSQYYNNRNSELSSNPNGPNGTSATNQQQNYRWM
SRTYYYVHYLEAIDSIKWKIHCLVKQVKDDIGQFNDPQGYVCPTCHAKYSLLDVPSLLSE
DRMCFECSVCGDTLIEDDSGLEAQKGQEKLERLMGQLEPIIESLKKIDSMKVEDNNFESS
LIKAVPATSTSIALYTISNRINTRRKKGANDKDTEDAARRSQATVHVSITADDEELVRAR
RKREQRNVKLRQNAMPSWHRESAVGQGSLGVNREESANSVEFTAAEQVVEKLDSSIGVNG
GNEAADEVNATDKANDVNEANRDKDVKMEHSEEIKPSLQALESPQLTGTPQPVETPTSVD
SNLLNSDTDSTSNSTKMEIKTEQPPATGGSEVSLLEEGSATTEEMDALTAYYAQLRKRQA
EEEEEEEDEDEDEDIDEDEFEAFETDDEADGPAEKDNTMDKITGENTEKVTNEKIETKKE
SADSSDLDEDEIDDAIFDELNE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcacagaaaagcagtagagaaagaggtctaccaccttttaaggttggtggta
cgatccttttacccgcaccagtgcgtgcttatagtggaggctctcattttccattctgtt
ctctacgaagatgatctgcttaagcttacttgcatgcacaaaaaggtatttcggtcattt
tgcaatcgactcgtagaagatcgtcttattattgcttatacacaaaaggaggaagcggca
aaccaaactggagggtattactctcagtattacaacaaccgaaacagcgaattaagttcg
aatcctaatggaccgaatggtaccagtgccacaaaccaacagcagaattatagatggatg
tctagaacttactattatgttcattatttggaagctattgattcgatcaagtggaagatt
cattgccttgttaagcaggttaaggacgatataggtcagtttaatgatcctcagggatac
gtgtgtcctacatgccatgccaaatactctttattggacgttccatctttacttagtgag
gatagaatgtgctttgagtgcagtgtctgtggagatacattgattgaggatgattctgga
ttggaggcgcagaagggtcaggagaagttagagagattgatggggcaattagagcctatc
attgaatcattgaagaagattgactcgatgaaagttgaggacaataactttgagagttct
cttattaaagcagtacctgccacgtctacatccattgccttgtacacgatttctaaccgc
attaatacgagaagaaagaagggagccaacgataaagatacggaagatgctgccagaagg
tcgcaagccacagttcacgtgtctattacggctgacgatgaagagttggttagagcaaga
cggaaaagagagcagagaaatgttaagttacggcagaatgcgatgccttcgtggcataga
gagagtgctgtgggtcagggaagtttgggagttaatagagaggagtctgctaattctgtg
gagtttacagctgctgaacaggttgttgagaaactggactcatccattggggtcaatgga
ggaaatgaagcggctgatgaggttaacgcaactgacaaggccaatgatgtcaatgaggcc
aatagggacaaagatgtcaagatggaacactcggaagagataaagccatcactacaagct
ttggaatctccacaacttacagggacgccacagcctgtagagacaccaaccagtgttgat
tccaaccttctcaactcggatactgacagcacttctaatagcacaaaaatggagatcaag
acggagcaacctccggctactggtggttccgaggtatctcttttagaggaaggctcggct
actacagaggagatggatgcgctcacagcgtattacgcacagctcagaaagagacaagcc
gaagaagaagaagaagaggaagatgaggacgaagatgaagatatcgacgaagatgaattt
gaagcttttgaaactgacgatgaggcagacgggccagcagaaaaggataatacgatggac
aagattactggtgagaatactgaaaaggttacgaacgagaagatagaaacaaaaaaggag
agcgcggattcatctgatctggatgaagacgagatcgatgatgccatttttgatgaattg
aacgagtga
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