Brettanomyces nanus: FOA43_001166
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Entry
FOA43_001166 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bnn
Brettanomyces nanus
Pathway
bnn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOA43_001166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_001166
Enzymes [BR:
bnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOA43_001166
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
FOA43_001166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
62194567
NCBI-ProteinID:
XP_038777416
UniProt:
A0A875RWV9
LinkDB
All DBs
Position
1:2501412..2506325
Genome browser
AA seq
1637 aa
AA seq
DB search
MDMTKPVGSEITYVDFSVLTTGEIRKLSAKQITNPSAFDSLGHPVPGGLYDLALGAFFRN
NCATCGLSERICPGHQGHIELPVPVYNPMFFSRLFLLSRGSCIYCHHFKIRSIKLHAYEC
KLRLIQYGLILEASQIDKLQVDTDGDDEAVEYNKKSHEAHKLPVSPAESNLLQKRELFVY
ESINAALKDGRTSKGGVYTGAILQARKQLIKEIDKELVAKSRCENCGMHSPKLRNDGYSK
IFANALSPKERDANSTNMSLSGNILEGETSDTVEIASGKGSRYILSTEILGLLKAVFTVE
QPLVKCLFHSRPDTPKLVSADMFFLHVLVVPPTRFRMPQRLGDEVHENTQNELLSKVLTT
SLLIKDLNEQFLGLQKDITGEEEKKLIFNRLMNAFVTLQNDVNGFIDSSKNQNAGPSQTL
LPGIKQALEKKEGLFRKHIMGKRVNFAARSVISPDPMIETNEIGLPPVFATKLTFPEPVT
CYNVAEMRQCVINGPDKWPGATEVRDENGTISLVGMNEEQRQAVAKQLLTPSGEGNGVVN
KQVLRHIRNGDVVIMNRQPTLHKASMMGHRVRVLPNEKTLRIHYANGGPYNCDYDGDEMN
LHFPQGELARAEAYNLANTDSQYLTPTSGSPVRGLIQDHLSTGVWLTNKETFFTREKYQE
LVYGCLRPEHNGHGFGSGSWRVKTLPPTIFKPVQLWSGKQVISSVLLNIRPAHLPGVNLE
SKNKIKNEYWGEGSHENEVIFKNGQLICGILDKSQYGSSKYGIIHAIHEAYGPDTAQRAL
SSLGRLLTNYEQWIAFTCGMDDLELTTSGNTDRDRILSKAKEVGRKAAADVTNLDEDIPV
TNPEFHKRLEEVLRDDEKHAILDAVTMSKVNAITTEVVESCVPAGTVKKFPQNSMQAMAL
SGAKGSNVNVSQIMCLLGQQALEGQRTPVMVSGKTLPCFKPFDTDARAGGYIKNRFFSGI
RPQEYYFHCMAGREGLIDTAVKTANSGYLQRCLTKQLEGVHVGYDNTVRNADGSLIEFLY
GGDAVDVVKESYLFKFNFFYENYQALLQKYSPSNIDNLDSETAVHYSKKFRKELKRQADV
PAWKQSYDHDPTVSLFNPSRYLGSVSTRFEEELDKFIEQNKSLFKKHSETGVSSKKFKAL
MQLKYMRSLIDPGEAVGIIASQSIGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTA
SSSIKTPQMTLPLLTDVDEPAADAFCKTISRLTLSAFIDDVTVTEITADPNQPESRRSYE
IRLKFFDSKDYKEEYDLTKEELEIVVSDEFLAMLESEIVKEIRKQKKVVEELQDIGHAVE
SKSDEVDGAPLGSLDDDYSAQKEKSKSKQSASYDGPDDDELEAIRKAEKSDSDTGADSSI
DISSDEDDDMQDDDDEPIDVSKKTQLKGNSHLDMSKEAIKRELKVIDSHEFISEFNFDDD
SGKWCQFKLELSGDTEKLLMVNIVEEMCKKCVVRSVAHIDRCLHEEGSRDLVTEGVNFQA
MWEHDSFIDVNAIRSNDIAAVLHVYGVEAARNTIVNEVINVFGRYAIEVSSRHLDLIADY
MTRDGSYLAFNRQGIDSCTSDFMKMSYETTCQFLTKAVLNGNREQLESPSARLVIGKLNK
VGTGSFDVLAKMPVRAN
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggatatgacaaagcctgtgggctcggaaatcacttatgttgacttcagtgttctcaca
actggggaaataagaaagctttcagcaaagcaaatcacaaatccgtcagcctttgatagt
ttgggacatccagttcctggtggtttgtacgatcttgcgttaggtgctttttttcgtaat
aactgtgctacatgcggattgtctgagaggatttgtccgggtcatcaaggtcatattgaa
ttacctgttcccgtctataaccctatgttctttagcaggctttttctcctttctcgtggc
tcatgtatttactgccatcattttaagataagatctatcaagttgcatgcatacgaatgt
aaacttcgtttaattcagtacggcttgattttagaagcttctcagatagataagctgcag
gttgacactgatggagacgacgaagccgttgaatataataaaaaaagtcacgaggctcac
aagctaccagtttctccggccgaatctaacctacttcagaagagagaattgtttgtttat
gaatccatcaatgccgctttaaaggatggtcgtaccagtaagggaggtgtgtacacgggt
gctattcttcaggctcgtaagcaactcatcaaagagatagataaggaacttgttgccaaa
tctcgttgtgagaattgtggaatgcattcacccaaattacgtaacgatggctactctaag
atcttcgctaatgctctttctcctaaggaaagagatgctaacagtaccaacatgtcttta
tctggcaatattcttgagggtgagactagcgacaccgtcgagattgcctctggaaagggt
tctcgttatatcctttccactgagatccttggcttattgaaagctgtttttactgttgag
cagcctcttgtgaaatgtctgtttcactcgaggcccgatactccgaagttggtttctgct
gatatgttctttttacatgtcttggttgtcccgcctacgagattccgtatgcctcaaagg
ctgggtgacgaggtgcacgaaaacacacagaatgagcttctttccaaggttcttaccact
agtcttttgattaaagatttgaatgagcagttccttggattgcagaaagatatcaccgga
gaagaagagaaaaaattgattttcaatagattgatgaatgcttttgttactcttcaaaac
gatgtcaatggatttattgattctagtaaaaatcagaatgccggtccctcgcagaccctc
ttaccgggtatcaagcaggccttggagaagaaagaggggctattccgtaagcatataatg
ggaaaacgtgttaattttgccgcccggtctgttatttcaccagatcctatgatcgagacg
aacgagatcggtttgccccctgtgtttgctacgaaattgacttttccagaacctgttact
tgttataatgttgctgagatgagacagtgcgttatcaatggaccggacaaatggccggga
gccactgaggtgcgcgatgagaatggcaccatcagtttggttggtatgaacgaagagcag
aggcaggccgttgccaagcagttactcacaccctcaggggaaggtaatggtgttgtgaac
aagcaagtgcttagacatattagaaatggcgatgttgttattatgaatcgtcaacctact
cttcataaggcctccatgatgggtcatagagttagggttttgccgaatgaaaagactctt
cgtattcattacgcgaatggtggtccttacaactgtgactatgatggtgatgaaatgaac
ttgcactttccgcaaggtgaattggcacgtgcagaagcctacaatttagctaatacagat
tcacaataccttactcctacttctggttcccctgttcgtggtttgattcaggatcatctt
tccactggtgtatggttgactaataaagagaccttcttcaccagagaaaaatatcaagaa
cttgtgtacggatgtctcagacctgagcataatggacatgggtttggctccggttcttgg
agagtgaagacactaccacctacaatcttcaagcccgttcaattgtggtctggtaagcaa
gtgatatcttctgtcttgcttaacatcagacctgcccaccttcctggagttaatttagag
tccaagaacaaaatcaagaacgagtattggggagaaggatcccacgaaaatgaagtcatt
ttcaagaacggccaattaatttgcggaattcttgataaatctcagtatggttcctctaag
tacggtattattcacgccattcacgaggcatacggcccagatacagctcagagagcgtta
tcctccttaggaagattgctcaccaactacgagcagtggattgcatttacctgtggtatg
gatgacttagagttgaccacttcgggaaatactgatagggatagaatattgtctaaagcc
aaagaggttggtcgtaaagctgctgctgatgttaccaacttagatgaagatattccggtg
accaaccccgagtttcacaaacgacttgaagaggtgttgagagatgatgaaaaacatgcc
attttggatgctgttactatgtccaaagtcaacgctatcactaccgaggtggtggagtct
tgcgtccccgcaggcactgtgaagaagtttccacagaattctatgcaggcgatggcatta
tctggtgctaaaggttctaacgttaatgtgtcgcaaattatgtgtttgttaggacagcag
gctttggagggtcagcgaactccagtcatggtttcaggtaaaacattaccttgtttcaaa
cctttcgacaccgatgctagagctggtggttatatcaagaaccgtttcttttctggaatc
agaccccaggagtactacttccattgtatggcaggtcgtgaaggtttaattgatactgct
gtgaagactgccaactctggttacttgcaacgttgcttgactaaacagttagaaggtgtt
catgttggttacgataacactgtcagaaacgcagacggaagccttatagagttcttgtat
ggtggcgatgctgtggacgtagtcaaggagtcctacttatttaagttcaacttcttttac
gagaattatcaggctttattgcagaagtacagtccatctaatattgacaacttggactcc
gaaactgccgttcattactccaagaagttccgtaaagaactgaagaggcaggcggatgtt
cctgcatggaaacagtcatatgatcatgatcctacagtctccctgttcaacccatcgaga
tatttgggttctgtttctacacgttttgaggaggaattggacaaattcattgagcagaat
aaatctctgttcaagaagcattctgaaactggcgtctcatctaagaaattcaaagctctt
atgcaactcaagtatatgagatctcttatagatcctggtgaagcagttggtattattgca
tctcagtccattggtgagccgtccactcaaatgactttaaataccttccactttgccgga
catggtgctgccaatgtcactttgggtattccacgtcttcgtgagattgtcatgaccgct
tcttcttcgattaaaactccgcaaatgactctgccattgttgactgacgttgatgaacct
gccgctgatgctttctgcaaaacaatctccagacttacgctttccgcgtttattgacgat
gtcacggttactgaaattactgccgatcctaatcaaccagagtcgagacgttcttatgaa
atccgtttgaagttctttgattccaaagactacaaggaagagtatgatctcacgaaggag
gagttggaaatcgttgtttccgacgagttccttgcaatgctcgagagtgaaattgttaag
gagattagaaaacagaagaaagttgttgaggagttacaggatattggacatgctgtggag
tctaaaagtgacgaggtcgacggtgctccattgggttcacttgatgatgattactctgca
cagaaagaaaagagtaaatcgaagcagtctgcatcttatgatggtccagatgatgatgaa
ctagaggctatccgtaaggcagagaaaagcgatagtgatactggcgccgatagcagtatt
gatatcagcagtgatgaagatgatgatatgcaagatgacgatgacgagcctattgatgtt
tcaaagaaaacgcagctcaaaggcaattctcacctagatatgtcaaaggaagcaatcaag
cgtgaacttaaggttattgacagtcatgaatttatctcagagttcaactttgacgacgac
tctggcaaatggtgccagttcaagcttgaactttccggagatacagagaagttgcttatg
gtgaacattgttgaggaaatgtgtaagaagtgtgtggttcggagtgttgctcatattgat
cgatgcttgcacgaggaaggatcaagagatttggtcacagaaggtgttaatttccaagct
atgtgggagcatgactcgttcatcgatgttaatgccattcgttctaatgatatcgccgcc
gttcttcatgtctacggtgtggaagcagcaagaaacactattgttaatgaagtcataaac
gtgtttggccgttatgccattgaggtctcttcaagacatttggacttgattgccgattac
atgaccagagatggtagttatttggcattcaataggcaaggtattgactcttgtacctct
gactttatgaagatgtcttacgaaacgacctgccaatttcttacgaaagccgttctcaat
ggaaatagagaacagcttgagtctccatctgcccgacttgtcatcggtaaattgaacaag
gttggtaccggaagctttgatgtcttggctaagatgcccgtcagagccaactaa
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integrated database retrieval system