Brettanomyces nanus: FOA43_001282
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Entry
FOA43_001282 CDS
T07002
Symbol
DBP2
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bnn
Brettanomyces nanus
Pathway
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_001282 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_001282 (DBP2)
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_001282 (DBP2)
Enzymes [BR:
bnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOA43_001282 (DBP2)
Spliceosome [BR:
bnn03041
]
Complex A
U1 snRNP components
U1 related factors
FOA43_001282 (DBP2)
Complex B
FOA43_001282 (DBP2)
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
Pre-60S particles
Helicases
FOA43_001282 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
62194683
NCBI-ProteinID:
XP_038777531
UniProt:
A0A875RXY4
LinkDB
All DBs
Position
1:join(2737302..2738574,2738971..2739341)
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AA seq
547 aa
AA seq
DB search
MSYENDNRGSFRSYGGSSGHSYERRDNFHNEGGYRGGDRYGGDFRGGRNNYDEHELGSGL
QKQEWDLDTMPKFEKDFYKEDPVVAGMTEEAIAKFRKDNEMSIFGKDVPRPISTFDEAGF
PDYVLKEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLAYCLPAIVHINAQPL
IQPGDGPIVLILAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGPQIRDLARGVEIV
IATPGRLMDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT
WPKSVKGLARDYLKEYIQVNIGSLELSASHTIKQIIDVISEFEKRDKCCKYLEKEMLTED
PKILVFASTKRTCDELTTYLREEGYPALSIHGDKEQRERDWVLEEFRSGRSPIMVATDVA
ARGIDVKGVSSVINFDMPGNVEDYVHRIGRTGRAGAKGTAVTFFTKDSAGLAHDLIVILR
EAKQEIPDDLQALDRRGNRGGNGRGGYGGRGGGRRYGRGSGRGRGGYRRNNGYQSGANNA
PMGQRRF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgaaaacgacaacagaggatcattcagaagttacggtggctctagtggccac
agttacgaaagacgagacaacttccataacgaaggaggctacagaggcggagatcgttat
ggtggagatttcagaggtggtcgtaacaactatgacgaacatgaacttggttccggatta
cagaaacaagagtgggatcttgacactatgccaaagtttgagaaggatttctataaggag
gatcctgtcgttgctggtatgaccgaggaggccattgctaaattcagaaaggacaatgag
atgtcgatcttcggtaaggatgtgccaagacctatctcgacttttgacgaggccggattt
cctgattatgtcttgaaagaggtcaaagctgaaggttttgataagcctactggtatccag
tgccaaggttggcctatggcattgtctggtagggacatggttggtattgcagctaccggt
tctggtaagactttggcatactgtttgcctgcaattgttcatatcaatgctcaaccattg
attcaaccaggtgacggtcccattgttttgattttggcacctaccagagagttggccgtt
caaattcagaaagaatgtagtaaatttggtaaatcttctagaattagaaacacctgtgtt
tacggaggtgttcctagaggtcctcaaattagagatttggccagaggtgtcgagattgtt
attgccactcctggtagattaatggatatgttggagtctggaaagactaacttacgaaga
gttacatacttggttcttgatgaggctgatagaatgttggatatgggtttcgaacctcaa
attagaaaaatcgttgatcagattcgtccagatagacagacccttatgtggtctgctacc
tggcccaaatctgtgaaaggtttggctagagattatttgaaagagtatatccaggtgaac
attggttcattggaattgtccgcctctcatacaatcaagcaaataattgacgttatttct
gagttcgagaaacgagacaagtgctgcaagtacttggagaaggagatgttgactgaggat
cctaagatccttgtcttcgcttcaactaagagaacttgcgacgaattaactacgtatctt
cgtgaggagggatatccagctctttctattcacggtgataaagaacagagggaaagagat
tgggtcttagaggaattccgttcaggaagatctccaatcatggttgccaccgatgtggca
gccagaggtatagatgtcaagggagtcagttctgtgattaacttcgacatgcctggtaat
gttgaggactatgttcatcgtattggaagaactggtagagcaggtgccaagggtactgct
gttacgttcttcaccaaggacagcgcgggcttggctcacgacttgatcgtgatcttgcgt
gaagctaagcaggagattccagatgacttacaggctttggacagaagaggaaaccgtggc
ggtaacggtagaggaggctacggaggaagaggaggtggtagaagatacggcagaggaagt
ggccgtggtcggggtggctacagaagaaataacggctaccagagcggagctaacaatgct
ccaatgggtcagagaagattctaa
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