Brettanomyces nanus: FOA43_001318
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Entry
FOA43_001318 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bnn
Brettanomyces nanus
Pathway
bnn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FOA43_001318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_001318
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FOA43_001318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
MMR_HSR1
Roc
GTP_EFTU_D2
Ras
SRPRB
PP_M1
GTP_EFTU_D3
G-alpha
Motif
Other DBs
NCBI-GeneID:
62194719
NCBI-ProteinID:
XP_038777566
UniProt:
A0A875RX55
LinkDB
All DBs
Position
1:complement(join(2823977..2825988,2826078..2826315))
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AA seq
749 aa
AA seq
DB search
MSGYSQDDLIDYSEKDEGIFDEDHSANEEYDKLYELLPQLKKQVAGKYQHLDEKKMKELL
WNNYFNVEDTVTEIKDTFKGRNASASDVPRVNGGLSGLLLKRHSKFQPSSGGGLAGLMAR
KHIKDEESTTGLSKLAMRIKKQRMEGPATVIERMKKVPVKLVPPKVLELPPKKSPEPASP
PVRSFSPELPKLPEFSLTAPVHLTSFPSSLLTRVIFFDQLGQASPNLIHERHQLGTKLKT
DLDFFRTFTNSHSDIARRVTANFSEPSPDEKQRKLDQMTSEMSKVNLSKKKAPAKPHTTK
PKKKIDLQKELSEKSSKPNLSFIVIGHVDSGKSTMIGRLLYDLKIVDSKTMHRLTKESDS
IGKSSFSLAWIMDQTPEERSRGVTVDICQTQFETKTSRFTVIDSPGHKDYVPKMINGVTQ
ADIAVMIVDTASFEAGFSNNGQTKEHLTIAKNLGIKRCIIAVNKMDTVDWDVSEFIGVRD
QLSAFLIENLKYEADNLIFVPTSGFLGDNVVKKSTNCSWYKGKPLMQLLEEESRGNNRVF
DEKSRFIMTINDLQQGSRDDELILGGRINSGFVQPGETILIAPGQESATVDSICVSSSDV
GSSILKKSLQNLAIEGEFVELKLKKIDNADNIKIGDLITKIDDPLESVRKLRCEITCFNL
DRPLLVGTPFILFRGNVSIPSRFSKIEQIITASGKLNKKRKHLSSDNSGIAEIEILDGEI
PIITFKESEKLGRIVIRKDGKTVGAGRVL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctactctcaagatgatctgatcgattattctgaaaaagatgaaggcattttt
gatgaggatcattcggccaacgaagaatatgataaattgtatgagttattgccacagcta
aagaagcaggtggcaggcaaataccaacatttagatgaaaaaaagatgaaggaacttctc
tggaacaactatttcaacgtggaggacactgttacagagatcaaggacactttcaagggg
agaaatgcctctgcttctgacgttccccgtgtaaacggggggctttctgggctactgttg
aaacgtcattctaagtttcagccctcgtctggagggggtttggctggcttaatggcccga
aagcatataaaggatgaggaaagtacgactggattgagtaagttggctatgcggatcaag
aaacagaggatggagggtcctgcaacagttattgaaaggatgaagaaagtaccggttaag
ttagtgccacccaaagttttggaattgcctccaaagaagtcgccagaacctgcgtctcct
cccgttcgttctttctctcccgaattacccaaactacctgaattctctctgactgctcca
gtccatcttacatctttcccgtctagtttgcttactagagtcatttttttcgatcaattg
ggccaagcaagtcccaatttgattcatgaacggcatcaattagggactaaattaaagacc
gatttggatttttttcgtacctttactaactctcattccgatatagcacgcagggtcaca
gcgaacttttctgagccaagccctgacgagaagcagagaaagttggatcagatgaccagt
gaaatgtctaaagtcaatctttctaagaagaaagcaccggccaagcctcacactaccaaa
ccaaaaaagaagattgatttgcagaaagaactctcggagaagtctagcaaacctaatttg
tcctttattgtcattggccatgtagatagcggaaaatcaacgatgatcgggcgactattg
tacgatttgaagattgtagactccaagactatgcatagattgactaaagaaagcgatagc
attggaaaatcatcattttcattggcctggattatggaccaaacaccagaagaacgatcc
cgtggggttactgtagatatttgccaaactcagttcgagactaagaccagtagattcacc
gtgatcgattctcctggtcacaaggattacgtgccaaaaatgatcaatggtgtgacacaa
gcagatatcgcagtaatgattgttgatacagcatcgttcgaagctggcttcagcaacaat
ggacagacgaaagagcatcttactattgccaagaacttgggtatcaagaggtgtattatt
gccgtgaacaagatggacactgttgactgggacgtgtctgaattcattggagtgagagac
caattgagtgcatttctaatagagaatttaaagtatgaagctgacaatttgatcttcgtt
ccaaccagtggattccttggcgataatgttgtaaagaagtccacaaattgttcctggtac
aaaggaaagccattaatgcagttgcttgaagaagagagtcgtggaaacaatcgtgtgttt
gacgaaaagagccgctttatcatgactatcaacgacttacagcagggaagtcgagatgat
gagctaattctggggggtagaatcaattctggatttgtccaacctggagagacgattttg
attgctcctggccaggagagcgccactgtcgatagcatttgcgtaagcagttcggacgtt
ggatcgtctatcctcaagaagtctctgcagaacttggcaattgaaggagagtttgtcgaa
ttgaagttgaagaaaattgataatgcggacaacatcaagattggagacttgataacaaag
attgacgaccctttagagtctgttagaaagctcagatgtgagatcacttgtttcaatttg
gacagacctttgttagttggtactccattcattttattcaggggaaacgtttccattcct
tctcgtttttccaaaattgaacagattataacggcatctggcaaattgaacaagaagaga
aagcacttatcgtccgataatagtggcatcgccgagattgagatcttagatggagaaatt
ccaataataacgttcaaggagagtgagaagttgggtcgaattgtaataagaaaggacgga
aagacggtcggagccggaagggtgttgtag
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