Brettanomyces nanus: FOA43_001349 Help Entry FOA43_001349      CDS       T07002                                  Symbol RPB2 Name (RefSeq) DNA-dependent RNA polymerase II   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism bnn  Brettanomyces nanus Pathway bnn03020   RNA polymerase bnn03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:bnn00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     FOA43_001349 (RPB2)   09124 Replication and repair    03420 Nucleotide excision repair     FOA43_001349 (RPB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bnn03021]     FOA43_001349 (RPB2)    03400 DNA repair and recombination proteins [BR:bnn03400]     FOA43_001349 (RPB2) Enzymes [BR:bnn01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      FOA43_001349 (RPB2) Transcription machinery [BR:bnn03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      FOA43_001349 (RPB2) DNA repair and recombination proteins [BR:bnn03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       FOA43_001349 (RPB2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP Motif Other DBs NCBI-GeneID:  62194750 NCBI-ProteinID:  XP_038777595 UniProt:  A0A875RNQ5 LinkDB All DBs Position 1:complement(2889757..2893581) Genome browser AA seq 1274 aa AA seqDB search MSEYAIPEEDAISTEDCWTVISSFFEAKGLVSQQLESFEEFVESSIQELVLEDKKLILDQ PAQHITEDDDINRRYEITFGDIFLSKPSQTEADGTTSTLLPQEARLRNLTYSAPLYVEMK KMVKESLDDDDTTAPTASSSSQVQWYREGEITKYRNGAVHDLIPIPASFNDEEDNVVDEK HGTKFHTSGAETQTIFIGKVPIMLKSKFCTLYGLTEDELYEIRECPYDMGGYFIINGSEK VLIAQERSAANIVQVFKKPPPSPISHIAEIRSALEHGSRLISSIQVKLSRGGASSLKSGG VGRSIMTTLPYIKADIPIVIVFRALGVIEDGDILQHICYDENDWQMMEMLKPCIEEGFLI QSQEVALDFIGRRGNAVGIKRDRRIQFAKDILQREFLPHISQDSGYETNKAYFLGYIVNR LLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLSKDIYRYMQRCIERGEDFNI VSAVKSTTITSGLKYSLATGNWGEQKKAMSSRAGVSQVLNRYTYASTLSHLRRTNTPIGR DGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMAGISVGTSAEPISYLLEEWGLE PLSDYDPQEHQNATRVFLNGDWVGTHRDPGMLVDTMRQLRRSGTISSEVSLVRDIREKEF KIFTDAGRVYRPLFIVDNDLDSPHKGSLKLTKEDVRKIRDREVEEIPPDEEYDEEGNPAE PIRRVCGWDSLLSNGIVEYLDAEEEETTLIAMSPEDLLPISKHDLRREVELDPAKRITTH INSHSFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVYLTNYNVRMDTM SNILYYPQKPLAKTASMEFLKFRELPAGQNCIVAIACYSGYNQEDSVIMNQSSIDRGLFR SLFFRTYMDQERRNGISIVEEFEKPIRSNTLGFKVGTYEKLDDDGLIAPGVRVSGDDIII GKTVPIPPDTEELGQRTKYHTKRDASTPLRTAESGIVDQVMLTTNAEGLKFVKVRMRTTK VPQIGDKFASRHGQKGTIGMTYRHEDMPFTAEGIVPDIIINPHCIPSRMTVAHLIECLLS KVAALRGYEGDATPFTDLTVDAVSKLLRENGYQSRGFEVMYNGHTGKKMMAQVYLGPTYY QRLRHMVDDKIHARARGPYQNLTRQPMEGRARDGGLRFGEMERDCMIAHGVAGFLKERLM DSSDAFRVHVCGICGLMSVVANLKKNQFECKSCKNKTNIYQIHIPYAAKLMFQELMSMNI APRLYTQKSGYSVR NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgtccgaatacgccattccagaagaagatgcgatttctactgaagactgttggacggtg atttcgtcgttttttgaggccaaaggtttggtttctcagcagttggaatcttttgaagag ttcgtggagtcgtccattcaggagttggttctagaagacaaaaagttgattttggaccaa cctgcacagcatattaccgaagatgatgacatcaatcgtcgttatgagatcacttttggt gatatttttctttctaagccatcccaaactgaggctgacggtaccacttctaccttactc cctcaggaggctcgtttaagaaacttgacttactctgctcctttgtacgttgagatgaag aagatggtaaaagaaagtctcgatgatgacgatactactgcacctactgcttcttcatcg tctcaggttcaatggtatagagaaggtgaaattacaaaatacagaaatggcgctgtccat gatctaatccccattccagcatctttcaatgacgaagaggataatgttgttgatgaaaag catggcactaaatttcacactagtggtgcagagactcagactatttttattggtaaagtg cctatcatgttaaagtccaagttttgtactttgtacggccttaccgaggatgagttgtat gaaattcgtgagtgtccctacgatatgggtggttacttcattattaacggctctgagaag gtgttgattgctcaggaaagatctgctgccaacattgtccaggtgttcaagaagcctcct ccatcccctatttcccatatagctgagatcagatccgctttagagcatggttccagatta atttcttccatccaggttaaactgtctcgtggtggtgcctccagtttaaagagcggtggt gtcggaaggtccattatgaccaccttgccttacatcaaggctgatattcctattgttatt gtgttccgtgcccttggtgtcattgaagatggtgatattctccagcatatctgttatgac gaaaatgattggcagatgatggagatgttaaagccctgtattgaagaaggtttcttgatt caatctcaagaagttgcccttgacttcattggtcgtagaggtaatgccgtgggtattaag cgcgacaggcgtattcagtttgcaaaggatatcttacaacgtgagttccttcctcatata tctcaggattctggttacgagaccaataaggcatatttccttggttacatcgtcaacaga ttgttactatgtgctttagagcggaaagagcccgacgatagagatcactttggtaagaag agattggatttggcaggtcctttgttggccaacttgttcagaatcttattcagaaagtta tccaaggacatttacagatatatgcagagatgtatcgagcgtggtgaagacttcaatatc gtctctgccgtcaaatcgacaaccatcacctctggtttgaaatactctctcgctacgggt aactggggtgaacaaaaaaaggcaatgagctcacgtgcaggtgtgtcgcaggtgttaaac agatatacatacgcctccacgttgtcgcatttgcgtagaactaatactcccatcggaaga gatggtaaattggccaagcctcgtcaattgcataacactcattggggtttggtttgtcct gctgagactcccgaaggtcaagcctgtggtttagttaaaaacttgtctcttatggcaggt atatctgttggtacatcagctgagccaatcagctatcttttagaagaatggggtttggaa ccactatcggattacgaccctcaggaacatcaaaatgccactagagtgttccttaatggt gattgggttggtacgcatagggatccaggaatgttggtcgatactatgcgtcagttgaga agaagtggaactatctcatcagaagtctctttggtgagagatattcgtgagaaagagttt aagatcttcacggatgctggtcgtgtctatcgcccgttgttcattgtagataatgatttg gattcaccccataagggaagcctcaagttgacaaaagaagacgttagaaaaattagagac cgtgaagttgaagagattcctccggatgaagaatacgacgaggagggtaaccccgcagag ccaattcgcagagtgtgtggatgggactctcttcttagtaacggtattgtagaatatttg gatgccgaagaggaagagactacgttgattgcaatgtctccagaagatttgcttccaatc agcaagcacgatctaagaagagaggtggagctggatcctgcaaagagaattacgacgcac ataaacagtcattcgttcacacattgtgaaatccatccttccatgatcttgggtgtggct gcctccattattcccttcccagaccataaccagtctcctcgtaatacatatcaatctgct atgggtaagcaggctatgggtgtctaccttacgaactataacgtgcgtatggatacgatg tcgaatatcttgtattatccgcagaagcctttggccaagacagcatcgatggagtttttg aaattcagagaactacccgctggtcagaattgtattgtggctatcgcttgctactccggt tataaccaagaagattctgtcattatgaatcaatcttctattgaccgtggtttatttagg tcacttttcttcagaacctacatggatcaggagagaagaaacggtatctcgatcgtggag gagttcgaaaagcccatcagatctaacactttgggattcaaggttggtacatacgagaag ttggatgacgatggtctcattgcacctggtgtgagagtctctggagatgacataatcatc ggcaagacagtgccaattccaccggacacagaagaattgggacagaggacaaaataccat accaaaagagatgcctcgacaccacttagaactgcagagagtggtattgtggatcaggtg atgttgacgaccaatgcagaaggtttgaagttcgtgaaggtgaggatgagaacgactaag gttccacagattggagataagtttgcctctagacatggacagaaaggtaccattggtatg acttatagacatgaggatatgccatttactgccgagggtattgtgccggatatcattatc aatcctcattgtattccttctcgtatgactgttgcccatttaattgagtgtttgctatct aaagtggcagctttgcgtggatacgagggagatgctactcctttcacagatttaacggtg gatgccgtgtctaagttgcttagagaaaatggatatcaaagtagaggctttgaagtgatg tataacggtcacactggtaagaagatgatggctcaagtgtacttgggacctacgtactac cagagattgagacatatggttgatgataaaattcatgctagagctagaggaccataccag aacttgactaggcagcctatggagggtagagccagagatggtggtttgagattcggagag atggagagggattgtatgattgcccacggtgttgctggattcttgaaagagagattgatg gattcttcggatgcattcagagtccatgtctgtggtatctgtggattgatgtctgtggtt gccaacttgaagaagaaccagtttgaatgcaagtcttgtaagaataagactaacatttac cagattcacattccttacgctgccaagttgatgttccaagagttgatgagcatgaacatt gcaccgaggttatatacgcagaagtctggatactctgtgcgttag

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