Brettanomyces nanus: FOA43_001622
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Entry
FOA43_001622 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
bnn
Brettanomyces nanus
Pathway
bnn03030
DNA replication
bnn03410
Base excision repair
bnn03420
Nucleotide excision repair
bnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOA43_001622
03410 Base excision repair
FOA43_001622
03420 Nucleotide excision repair
FOA43_001622
03430 Mismatch repair
FOA43_001622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnn03032
]
FOA43_001622
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_001622
DNA replication proteins [BR:
bnn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
FOA43_001622
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
FOA43_001622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_22
Rad17
AAA_16
AAA_5
nSTAND3
AAA_28
Gp44_lid
RuvB_N
AAA_30
AAA_18
RNA_helicase
AAA_14
AAA_17
ATPase
NTPase_1
ABC_tran
AAA_33
AAA_11
AAA_7
Motif
Other DBs
NCBI-GeneID:
62195023
NCBI-ProteinID:
XP_038777861
UniProt:
A0A875RYR3
LinkDB
All DBs
Position
1:complement(join(3470156..3472696,3472781..3472825))
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AA seq
861 aa
AA seq
DB search
MPRLDAFFGANAVQRNKIKRSAGSSKDQGCVKRQKKNVSDSTKSSYFGAKSGKAEIIDLD
SGDDDEDEIEKEKPMAIKKAIAISPKKGKAKKIIKAAAKTSKPSKSPKSSLAATGLKTAE
DILSTIPDADESYLKVDPEAANMNYFQLKARQKDITPVEGEHKEIPKARSNCLNGLTIVF
TGVLPFIGREECERLASQYGAKVTKSISGRTGVVVIGRDAGPKKVTLIKQKHIKCIDEDG
FIQLLAKMPENGGSGEAAQKELAKKEREISKAIEEAEQEEKEEKSHRRSQKSNQDKVTRG
PESQLWTVRYAPTDLRQICGNKGNVEMLYNWLDHWFETQHEGKYSRGAGIDNYRSVLISG
PPGTGKTTAANLVAHKVGYDIIEKNASDFRSKKILNQELKVCLDNTSVAGFFKQSTENEA
KVRRFVLVMDEVDGMSSGDNGGVAQLAQFCRVTKTPLILICNDKSLPKMRAFDRVCYDMT
WRRPTAREMRSRLMTIAHREGLKLDPNVIDELVSSTHNDIRQIINVMSTVARTQKTLNFQ
DASQIDKSWKKEVALKPFDVVGRLLSSGSYGDRAMYNINEKINLYFSDMDMIPLMMHENY
RSTQPAELFNHPPGKQNLVHLKLLAEASNSISESDLINKLIRGGDQQWSLLPFYGVASTI
IPGSKICGRVTSRVMFTSWLGQNSKSMKYKRVVQQLQYHSSTKTHTNNQELRLSYLPYLK
EMLTTPLIEKGADGIGETLQLLDQYYLTREDWDSIMEMGVGRQGKMDQKLKKIPSRVKTQ
FTRRYNSYVHPTIVYRTGQIKVGKVRKMKYDDTGDGGDDDDDDDDDNDDDDNDDTDSDMQ
DINKNSLIKAVNKKPKAKRTR
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcctagattggacgctttttttggtgccaatgctgtccaaagaaataaaatcaaaaga
agtgccgggagctcgaaagaccaagggtgtgtgaagaggcagaaaaagaacgttagtgat
tctaccaagtcatcatattttggggccaaatccgggaaagccgagattattgatcttgat
tctggtgatgatgatgaagatgaaatagagaaagagaaacccatggcgataaagaaggct
atagcgattagtcctaaaaagggaaaagcaaaaaaaatcatcaaagctgccgccaagact
tccaagccttccaaatctccgaagtcctctttggcagcaactggactgaaaaccgcagaa
gatatcctcagtacgattcctgatgctgatgagagctacctcaaagttgatccggaagcc
gcaaacatgaattacttccagttaaaggccagacagaaggatatcactccggtggaagga
gaacacaaggagattcccaaggcacgaagtaactgcttgaatgggttaactatagtgttt
acaggagtattaccatttataggacgtgaagagtgtgaaagattggcatcccaatatggt
gcaaaggtgaccaagtcgatcagtggacgcacaggtgttgtggtgataggaagggatgct
ggtcccaagaaggtgacgctgataaagcagaagcatattaaatgcattgatgaggatgga
tttatccagctgttggcgaagatgcctgaaaatggtggatctggagaagctgctcagaaa
gaactggccaagaaagaacgtgaaataagcaaggcgattgaggaggcagaacaggaggaa
aaagaggagaagtcacacaggagaagccaaaagagtaatcaagacaaagtaaccagggga
ccggagtctcagctctggaccgtaagatacgcaccaacggatttgagacagatctgcggt
aataagggtaacgttgagatgctttacaactggcttgaccattggtttgaaactcaacat
gaaggcaagtattctcgtggtgcaggaatcgataactatcgctctgtacttatcagtgga
cctccaggaacaggtaaaactacagcagctaacttggtggcccataaggttggttatgat
attattgaaaagaatgctagtgactttcgatccaaaaaaatcctcaaccaggagcttaag
gtgtgcttagacaacacttctgttgcgggatttttcaaacagagtaccgaaaatgaggct
aaagttagacgatttgtattggttatggatgaggttgatggtatgtcgtctggtgataat
ggaggtgttgcgcagcttgcacagttctgtcgagtcacaaaaactcctctgatccttatt
tgtaacgataagtcgttgcctaagatgcgggcatttgatcgtgtttgctatgatatgaca
tggagaaggccaactgctagagagatgaggtccaggcttatgacaatagcacaccgtgaa
ggattgaaattggatcctaatgtgatagacgagctagtctcctctacccataacgatatt
cgtcaaattattaacgtcatgtcaacagtggctcgtactcagaagacgttaaatttccaa
gatgcctcacagatcgataaatcgtggaaaaaagaagtggcattgaagccgtttgacgtt
gtaggaagacttttgagttctggttcctacggagatcgtgcgatgtacaatatcaatgaa
aagatcaacttgtatttcagcgatatggatatgattcctctcatgatgcatgaaaactat
cgatccacacagccagctgaacttttcaatcatccccctgggaagcaaaatttggtacat
cttaagttgcttgctgaggcatcgaactcgatctctgagtctgatctcatcaacaaacta
ataagaggaggcgatcagcagtggtctttgcttcccttctatggagtggcatctactatc
atccctggatcaaagatctgtggtagggtgacctctagagtgatgtttacctcatggttg
ggtcagaattcaaagtcgatgaaatataaacgtgtggttcaacaattacagtatcattca
tccactaagacgcatacaaataatcaggaacttcggctctcgtatcttccctacttgaaa
gagatgttgacgacacctcttatcgagaagggtgcagacggaatcggtgagactcttcaa
ttgttggatcagtattacctcacgagggaagattgggacagtatcatggagatgggggtg
ggaagacagggtaaaatggatcaaaaattgaagaaaatcccctccagagtcaagacccaa
tttacccgaaggtacaattcatatgtgcatcctacgattgtctacagaacagggcagatt
aaagtcggaaaggttcgaaaaatgaagtatgacgatactggtgatggtggtgatgatgat
gatgatgatgatgatgacaatgatgacgatgataatgacgacactgacagtgatatgcag
gatataaacaagaacagcctgattaaggcggtcaacaagaaaccgaaagccaagagaacg
aggtaa
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