Brettanomyces nanus: FOA43_001731
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Entry
FOA43_001731 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_001731
Enzymes [BR:
bnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOA43_001731
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
Pre-60S particles
Helicases
FOA43_001731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
62195132
NCBI-ProteinID:
XP_038777968
LinkDB
All DBs
Position
1:complement(3684101..3685960)
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AA seq
619 aa
AA seq
DB search
MSSTNWDDLSYKIQPWIKDAMLSLGFSHMTPVQASTIPLLSQNKDVVVQAVTGSGKTMAF
VIPVLEKICRIFLDEPFKKSHFGALVVSPTRELAKQIEAVFNSVLEYQPERSALPQIKTQ
LLVGSIQSLQEDLYTFISKRPQILVGTPGRINEFLRSSSVKTNSCEILILDEADKLLDMS
FLSSIESIVRFLPRQRRTGLFSATVSSAGNDIFKTGMTNPVKITVNSSSLPGADSTVPTS
LGLCYMVLQANMKLKVLLQLLTKYRYHKTIVYFPTCISVTYFYGIFHHLFCKMLQEKRID
DEIALFSLHGKLEAKPRMKTLSKFTESTEEKSVLFTTDVAARGLDIPDVDLVIQVDPPTD
PDMFLHRCGRTGRANKVGKAVTMLNKGREEDYVGFMDVKGITLEQMSVPKIELEFSEWYD
SSFRQWELEDRGRYDHAVRSYVAYVMYYSKHVASSIFRIRTLDYKGLASMYGLTRLPKMP
ENKYVEDFPEGGFLDSSINFDKYSYLDKSKEETRLYELKTQERKKERRAKTMKKKFLDEK
NTSWSDKSLKKGTKVERRVKMKRRREAVEIAIAQKEEEGDSNEAEDREKEKDWKEAVIES
KRRKKSKKQEMVQGSFDDL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacaaattgggatgatctatcttataagattcaaccttggatcaaagatgct
atgttgtctcttgggttttcccatatgacccctgttcaggcctccactattcctttgcta
tcgcagaacaaggacgtggtagttcaggcagtgacaggttcaggtaagacaatggccttt
gtcattccagtacttgaaaaaatctgccggatctttcttgatgaaccttttaaaaagtca
cactttggagctcttgtcgtgtctccaactagagagcttgccaaacagatcgaagccgtg
ttcaactctgtattggagtatcagcctgaacgcagtgctcttccacagatcaaaacacag
cttcttgtgggttctattcagtccttgcaagaggatctatatacgtttatctcaaaaagg
ccacagatccttgtggggactcccggtagaatcaacgagtttctccgtagcagctctgtc
aagacgaattcttgtgagatacttatactcgatgaggccgacaaactattagacatgagt
tttcttagttctatagaatctatagtgagattcttacctcgacagagaagaactggactt
ttttcggccaccgtttccagtgccggaaacgatatcttcaaaacaggcatgacgaatccc
gttaaaattactgtgaattcaagttctcttcctggtgccgattccactgttcccacaagt
ttgggactttgctatatggtacttcaggcaaacatgaagcttaaggtattgcttcaactc
cttacaaaatacagatatcacaagaccattgtatactttcctacgtgtatcagcgtgaca
tacttctatggcatctttcaccaccttttttgcaagatgttgcaggagaagaggattgac
gacgaaatagcgttgttttctttgcatggaaaacttgaggccaaacctagaatgaaaacg
ttgagtaagtttaccgagtctactgaggagaaaagtgttctcttcactaccgatgttgct
gctagaggattggacattccagatgtagatcttgtgattcaggtggatcctccaactgat
ccggatatgtttttgcatcgttgtggacggacgggaagagccaataaagtgggtaaagct
gttacaatgttgaacaaggggagagaagaggactacgttggtttcatggacgtcaagggc
ataactcttgaacaaatgagcgttcctaaaatagagctcgagttctcggaatggtatgat
tccagttttaggcaatgggaactcgaagatagaggtagatatgatcatgcagtgagatca
tacgttgcatatgtgatgtattacagtaaacatgtggcatcatctatattcagaataagg
acactggattacaaagggctagcttcaatgtatggattgaccagattgccgaagatgcca
gaaaacaaatacgttgaagattttccagagggtggatttcttgatagttctattaacttc
gacaagtattcatacttggataagagtaaagaagagacgagattatacgagttgaagact
caagagagaaagaaggagagaagggctaagacgatgaagaagaagttcttagacgaaaag
aatacttcgtggagtgacaagtcactgaaaaaaggaactaaagttgagcgacgagtgaag
atgaaacgaagaagggaggcagttgaaatagcaatagcgcagaaagaagaagagggtgac
agtaacgaagccgaagacagagaaaaggaaaaagattggaaagaagcagtgattgaaagt
aaaaggagaaagaagtcaaaaaagcaggaaatggttcagggaagctttgatgacttgtga
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