KEGG   Brettanomyces nanus: FOA43_001882
Entry
FOA43_001882      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K13217  pre-mRNA-processing factor 39
Organism
bnn  Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bnn03041]
    FOA43_001882
Spliceosome [BR:bnn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    FOA43_001882
SSDB
Motif
Pfam: HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_14 NRDE-2
Other DBs
NCBI-GeneID: 62195283
NCBI-ProteinID: XP_038778116
UniProt: A0A875RYF0
LinkDB
Position
1:4002320..4003786
AA seq 488 aa
MDFQDIPPKWLSLAQIVASNKGDVKLWDKLVDLTEHLPTKDDRYPVEVSQGSPPVMKSLL
FTVYENLLVNFPLCEQYWCNYASWKFKLGDEAHHVAQIYSNALSYMPKSLIIWRNYLKFT
IETQRSHCRIMDVLEDARIAVGHHFYAHVIYDIYLDFLKKSGHNKEYHLLLRRIIEIPMY
HYCKYFLEFTRLLEEADIVTIKYFVTAEDLYSSFKLTWGDLLKPADGKISKMKELKSKLK
KMFTDALITTQYHTFRLWSYERELKKPYYDPGSQLTRQELNTWNSYLNYLEINTLKDSFR
NGNSGTAKMNRALLETAYERCLIRTADYSFFWLKYSNLKLNMNMEDQAKQVLIKGIYLIN
DDEFKLRLRLVDLEILSGEISEAKDLTLEAYEQQPDNLALTLKILQIEHLIDRDSVVDLI
EAKLLEVEGGEFERQFDYLFREVLGYGSVSLTKIEALLKRYQDKKKDSYHYQKALKEFYR
CYKLTEDH
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggactttcaagatataccaccaaaatggttatcccttgctcaaattgttgcctcgaac
aaaggtgacgtcaaattatgggacaaactcgttgacttgacagagcatcttcctactaaa
gatgatagatatccggtggaagtctcccaagggtcccctcccgtaatgaaaagcctctta
tttacagtgtatgagaacttgcttgtcaattttcctctctgtgaacaatattggtgcaat
tatgcaagttggaaattcaaactcggtgatgaagctcaccatgtggctcaaatatactcc
aacgctctcagttatatgcccaaatcactgataatatggcgaaactaccttaaattcact
atagaaactcaaagatcccattgccgaatcatggacgttttagaagatgcacgaattgct
gtgggccatcacttctatgctcatgtcatttatgacatctacctagactttctaaagaag
tctggccataataaagaataccaccttttgcttcgacgaatcattgaaatacctatgtat
cattattgcaagtactttttggaattcactagactgctagaggaggctgatattgtcacc
atcaagtactttgtcacagcagaagacttgtattcgtctttcaagctgacttggggtgat
ttgctaaagcctgcagatggtaaaatttcgaagatgaaggaattgaagagtaaattgaag
aagatgtttaccgatgcgctcataactactcaataccacacgtttagactatggtcttac
gagcgagaattgaagaagccgtattatgatccgggtagccagttaactagacaggaactt
aatacgtggaacagctacttgaactatttggagatcaatacacttaaagattcttttaga
aatggcaattccggaactgccaagatgaaccgtgctctattggagacggcatatgaaaga
tgcctgataagaacggcagattatagcttcttttggctcaaatactcgaatttgaagctc
aacatgaatatggaggatcaggctaaacaagtgcttatcaaaggaatctatttgatcaat
gatgatgagtttaagttgagacttaggctggttgatttggagattctcagtggagaaata
agtgaggccaaagacttaacattggaggcttacgagcaacagcctgacaatcttgcattg
actttgaaaattctacaaattgagcatttgatcgatcgagatagcgtagttgaccttata
gaggcgaaactactcgaggttgaaggaggtgagtttgagcgtcagtttgactatttattc
agagaagtgcttggctacggaagcgttagtttgaccaagattgaagccttactgaaaaga
tatcaagataaaaagaaagacagctaccactatcaaaaggccctgaaggagttttatcga
tgctacaaactgaccgaagatcattaa

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