Brettanomyces nanus: FOA43_001882
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Entry
FOA43_001882 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K13217
pre-mRNA-processing factor 39
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_001882
Spliceosome [BR:
bnn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
FOA43_001882
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
Motif
Other DBs
NCBI-GeneID:
62195283
NCBI-ProteinID:
XP_038778116
UniProt:
A0A875RYF0
LinkDB
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Position
1:4002320..4003786
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AA seq
488 aa
AA seq
DB search
MDFQDIPPKWLSLAQIVASNKGDVKLWDKLVDLTEHLPTKDDRYPVEVSQGSPPVMKSLL
FTVYENLLVNFPLCEQYWCNYASWKFKLGDEAHHVAQIYSNALSYMPKSLIIWRNYLKFT
IETQRSHCRIMDVLEDARIAVGHHFYAHVIYDIYLDFLKKSGHNKEYHLLLRRIIEIPMY
HYCKYFLEFTRLLEEADIVTIKYFVTAEDLYSSFKLTWGDLLKPADGKISKMKELKSKLK
KMFTDALITTQYHTFRLWSYERELKKPYYDPGSQLTRQELNTWNSYLNYLEINTLKDSFR
NGNSGTAKMNRALLETAYERCLIRTADYSFFWLKYSNLKLNMNMEDQAKQVLIKGIYLIN
DDEFKLRLRLVDLEILSGEISEAKDLTLEAYEQQPDNLALTLKILQIEHLIDRDSVVDLI
EAKLLEVEGGEFERQFDYLFREVLGYGSVSLTKIEALLKRYQDKKKDSYHYQKALKEFYR
CYKLTEDH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggactttcaagatataccaccaaaatggttatcccttgctcaaattgttgcctcgaac
aaaggtgacgtcaaattatgggacaaactcgttgacttgacagagcatcttcctactaaa
gatgatagatatccggtggaagtctcccaagggtcccctcccgtaatgaaaagcctctta
tttacagtgtatgagaacttgcttgtcaattttcctctctgtgaacaatattggtgcaat
tatgcaagttggaaattcaaactcggtgatgaagctcaccatgtggctcaaatatactcc
aacgctctcagttatatgcccaaatcactgataatatggcgaaactaccttaaattcact
atagaaactcaaagatcccattgccgaatcatggacgttttagaagatgcacgaattgct
gtgggccatcacttctatgctcatgtcatttatgacatctacctagactttctaaagaag
tctggccataataaagaataccaccttttgcttcgacgaatcattgaaatacctatgtat
cattattgcaagtactttttggaattcactagactgctagaggaggctgatattgtcacc
atcaagtactttgtcacagcagaagacttgtattcgtctttcaagctgacttggggtgat
ttgctaaagcctgcagatggtaaaatttcgaagatgaaggaattgaagagtaaattgaag
aagatgtttaccgatgcgctcataactactcaataccacacgtttagactatggtcttac
gagcgagaattgaagaagccgtattatgatccgggtagccagttaactagacaggaactt
aatacgtggaacagctacttgaactatttggagatcaatacacttaaagattcttttaga
aatggcaattccggaactgccaagatgaaccgtgctctattggagacggcatatgaaaga
tgcctgataagaacggcagattatagcttcttttggctcaaatactcgaatttgaagctc
aacatgaatatggaggatcaggctaaacaagtgcttatcaaaggaatctatttgatcaat
gatgatgagtttaagttgagacttaggctggttgatttggagattctcagtggagaaata
agtgaggccaaagacttaacattggaggcttacgagcaacagcctgacaatcttgcattg
actttgaaaattctacaaattgagcatttgatcgatcgagatagcgtagttgaccttata
gaggcgaaactactcgaggttgaaggaggtgagtttgagcgtcagtttgactatttattc
agagaagtgcttggctacggaagcgttagtttgaccaagattgaagccttactgaaaaga
tatcaagataaaaagaaagacagctaccactatcaaaaggccctgaaggagttttatcga
tgctacaaactgaccgaagatcattaa
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