Brettanomyces nanus: FOA43_002238
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Entry
FOA43_002238 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bnn
Brettanomyces nanus
Pathway
bnn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FOA43_002238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_002238
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FOA43_002238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
62195639
NCBI-ProteinID:
XP_038778465
UniProt:
A0A875RPD4
LinkDB
All DBs
Position
2:557069..558022
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AA seq
317 aa
AA seq
DB search
MDDDDAFLYGEGGGKGNTGSTGIEAKDGDAVKAISTEDKETNNEENKKAESEEAENEEED
SSDSDVEFVIGSLESKPITDLVQEKDKEEDDVSGDGSVKAQTVPILTESKGLNIDEVGKY
HDIPVNSLTFEELKDKPWRLPGADLSDYFNFGFDELSWLAYCKKQNTLRKDFNPAKVIAE
LMGGGAMPPPPAASSGGQGRVGGGPNMPPPPFMMPPMGMPFMPPNMQMPGMFNGINNNNN
NNNSMNNTGGSRTPSLPNIPKLPSRPTSNSKSPEPSNRTSSMPQNSSYRDRADKATEMRS
SGHSGNQNYRDRPSRRR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatgacgcttttctatatggagaaggagggggtaaaggaaatacgggcagt
acgggaattgaggcgaaagacggcgatgctgtgaaggcgataagtacggaagataaagaa
accaacaacgaggagaacaagaaagctgaaagtgaggaagctgaaaatgaggaggaagat
tcatctgattctgacgtggagtttgtcattggttcattagaatcgaaaccaattacagat
ttggtgcaagaaaaggacaaagaggaggatgacgtatcaggagatggttctgtcaaggct
caaacggttccaattcttacggaatcaaaaggattaaatatagacgaggtgggaaaatat
catgatattcctgttaattcacttacatttgaagagctcaaggacaaaccgtggagacta
ccgggagcagatctttcagactatttcaacttcgggtttgatgaactttcgtggcttgcc
tattgtaaaaaacagaatactcttcgtaaggacttcaatcccgctaaggtgattgctgaa
ctcatgggaggaggtgccatgcctccaccaccagcagcgtctagcggaggccaaggaaga
gttgggggtggtcccaatatgcctccgcctccatttatgatgccacctatgggaatgcca
tttatgcctcccaatatgcagatgcctggaatgtttaatggtatcaacaacaacaacaat
aataataatagcatgaacaatacgggaggatcaagaacaccatccctgccgaacattcca
aagcttccgtccagacctacttcgaattctaaatctccagaaccttccaacagaacatca
tcgatgcctcaaaactccagctatagagacagggcagacaaggctacagagatgcgtagc
agcgggcattcaggaaaccagaattatagagacagaccatctcgtagacgatga
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