Brettanomyces nanus: FOA43_002262
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Entry
FOA43_002262 CDS
T07002
Symbol
RET1
Name
(RefSeq) DNA-directed RNA polymerase III core subunit ret1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bnn
Brettanomyces nanus
Pathway
bnn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOA43_002262 (RET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_002262 (RET1)
Enzymes [BR:
bnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOA43_002262 (RET1)
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
FOA43_002262 (RET1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
62195663
NCBI-ProteinID:
XP_038778489
LinkDB
All DBs
Position
2:596631..600086
Genome browser
AA seq
1151 aa
AA seq
DB search
MTTEDPILRNGNEAFDELLEPIYRGKSLTDPINTAKDKWNLLPAFLKVKGLVKQHLDSYN
FFVDVDLKKIVNANQLVLSDVDPSFYLKYLDIRVGYKSNGDRKTPEVLLPPHECRLRDLT
YSAPIYVDVEYTRGKKIIIHRDLEIGRMPIMLRSNKCILNGRNEKEMAYLNECPLDPGGY
FIVNGTEKVILVQEQLSKNRIIVETDPKKDIVQASVTSSTHERKSKTYVIAKNGKIYLKH
NSISEEVPIVIVLKAAGIVSDMEILQLVCGDDSVYQDLFAINFEEASKLGIFTQREALEY
IGRKVKTIRRMNSPKLTILQEGTEAIATTIVAHLTVDNLDFREKALYITTMARRVVMTMH
NPKLVDDRDYAGNKRLELAGQLLSLLFEDLFKKFNNDFKANLDKILKKPSRASEFDALLH
INIHSNNVTSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYIAALGMMTRISSQFEKSR
KVSGPRSLQPSQFGMLCPADTPEGEACGLVKNLALMTHITTDNEEAPIRKLCYLLGAEDI
SVADSAMIHTGGTFGVYLNGTMIAITRYPIEFVRKFRYLRRCGKVSAFVSIHTNVHQSAV
HIAADGGRICRPLIIVENGKSKVTVQHLRMLKADKWGFYDFLKHGLVEYLDVNEENDSLI
ALYEKDIIPMTTHIEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQFR
RIDTLLYLLCYPEQPMVKTKTIELVKYDKLPAGHNATVAVMSYSGYDIEDALILNKASID
RGFGRCQTLRKNTAVLKRYPNHTKDIVTGMRVDKEGKPIFQHAALGEDGLAEVGTRIQSG
QVFLNKCVPANAMGSVMGGPQSQDGQQQQYREAPMVYRGPEPSYVDQVMMTVGDNDQALI
KVLLRQTRRPELGDKFSSRHGQKGVCGMIVNQEDMPFSDQGISPDIIMNPHGFPSRMTVG
KMMELVSGKAGVLRGTLEYGTCFGGSDLEEMSKVLVEKGFNYGGKDMLYSGTTGEALQAY
IFFGPIFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGAS
QLLLERLMLSSDAFDVDICQGCGLMGYNGWCPMCKSSEKIVKMTIPYAAKLLFQELISMN
IAPRLKLSDVF
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgaagatcctatcttgcggaatggaaatgaggcatttgatgaattacttgag
ccaatttataggggcaaatctcttacagatcctattaatactgccaaggacaagtggaat
cttcttcctgccttcttaaaggttaaaggtttggttaaacagcatttagactcttataat
ttctttgttgacgttgatttgaaaaaaattgtcaatgctaatcaactagttcttagtgat
gttgatccctcgttttacctaaagtatcttgatatccgcgttggttataagagtaatgga
gatcgaaagacccctgaggtattattacctcctcatgaatgcagactaagagacttgact
tacagcgcaccaatatacgtggatgttgaatatactagaggtaaaaaaattattattcat
agggatttggagataggtcgtatgcctattatgctaagatccaacaagtgcatcttgaat
ggacgaaatgagaaggagatggcctatttgaatgaatgtccattagatccaggtggatat
tttattgtcaatggtactgaaaaggtaattttggttcaggaacagttgagtaaaaatcgt
attattgtggagaccgatccgaaaaaggacatagttcaagcttcggtgacttcctcgact
cacgagagaaagtccaaaacctatgttattgccaagaacggtaaaatctatttgaagcac
aactccatcagtgaagaagtgcccatagtcatagtgttgaaagctgctggcattgtcagc
gacatggagatcttacaacttgtctgtggtgatgattctgtctaccaggatttgtttgcc
attaatttcgaggaagcctccaaacttggaatctttactcagagagaagccttggaatat
attggtcggaaagtcaagaccatccgtagaatgaattccccgaaactaaccattcttcaa
gagggtacagaggcaatagcaacgactatcgtggcccatttgactgtggacaacttggac
tttcgtgaaaaggccttatatattaccacaatggcacgtcgtgtcgttatgaccatgcac
aatccaaagttggtagatgacagagattatgccggtaacaagcgtctcgagttggccgga
cagttgctttcattgttgtttgaagatctattcaagaagttcaacaacgatttcaaggcc
aatttagacaaaattctaaaaaaaccaagtcgtgcttccgaatttgacgctttgctccac
attaatatccattccaacaatgtcacttcgggactgaacagggctatttctacaggtaac
tggtcgttaaagcgtttcaagatggaacgtgcgggtgtgactcacgtgttaagtaggctc
tcgtacattgctgctcttggtatgatgacccgtatcagttcacagtttgagaaatccagg
aaggtgtctggacctagatctcttcagccctcccagtttggaatgctatgcccagctgat
acacctgaaggtgaggcttgtggtttggtgaagaacttggcattaatgacccatatcacc
acagataacgaggaggctcctatccgtaaattatgctatcttttgggtgcagaggatatt
tccgttgccgattctgctatgattcatactggtggtacatttggtgtttatcttaatggt
accatgattgccattactcgttatcctattgaatttgtccggaagtttcgttatttgaga
cggtgcggtaaggtgagtgcatttgtttccattcacacaaacgttcatcagtctgctgtt
cacattgctgcagacggcggccgtatttgtcgtccgttgatcattgttgaaaatggtaaa
tccaaggtgactgttcaacacctccgcatgttgaaggcggataaatggggattctatgac
ttcctcaaacacggattggtcgaatacttggatgtcaacgaagagaatgattcattgatc
gcattgtacgagaaagatatcattccgatgactacccatatcgagattgagcccttcacc
attttgggcgcagtggcgggtttaattccttatccacaccacaatcaatctcctcgtaac
acatatcaatgtgctatgggtaagcaggccattggtgccattggttataatcaatttcgc
cgtattgatactttattgtacttactttgctatcctgaacagccgatggtgaagaccaag
actatcgaacttgtcaagtatgataaacttccagcaggacataacgctacagtggctgtg
atgtcctattctggttatgatattgaggatgcgttgattttgaacaaagcctccattgac
cgtggctttggacgttgtcaaacccttcgtaagaatactgccgtgcttaaaagatatcca
aatcatacaaaggatattgttaccggcatgcgtgttgataaagagggtaagcccattttt
cagcatgcagctttgggtgaggatggtttggccgaagtgggtactcgtattcaaagtgga
caggtgtttttaaataagtgtgtgcctgccaatgctatgggtagtgttatgggaggaccc
caatcccaggatggtcagcaacagcaatatagagaggctcctatggtttatagaggacca
gagccaagttatgtggatcaagttatgatgacggtgggggataatgatcaagctttgatt
aaagtacttttaagacaaacaagaaggccagaacttggtgataagttttcttctcgtcat
ggtcagaagggtgtttgcggtatgatcgtaaaccaagaggacatgccatttagtgatcaa
ggtatcagtccggatattataatgaatcctcacggtttcccatctcgaatgacggtggga
aagatgatggagttggtttctggtaaagcaggtgttctcagaggtacattggaatatggt
acgtgctttggaggatctgatttggaggagatgtcaaaggttctcgttgagaagggattc
aattacggtggtaaggacatgctgtatagcggtactacgggagaggcactgcaagcatat
atcttcttcggccctattttctatcagaagttgaagcatatggttatggacaagatgcat
gctcgtgcaagaggtcctagggctgttttaactagacagcccacggagggtagatccaga
gatggtggtttaagattgggagagatggaaagagactgtgtaatcgcttacggtgcatct
cagttgttattagagagattgatgttgagttcggatgcctttgacgtggatatttgccag
ggttgtggactaatgggctacaatggatggtgtccaatgtgcaagtctagtgaaaagatc
gtcaagatgacaattccatacgccgctaaattgttgttccaagagttgatctcaatgaac
attgctccaagattgaagttgagtgacgtattttga
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integrated database retrieval system
