KEGG   Brettanomyces nanus: FOA43_002369
Entry
FOA43_002369      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
bnn  Brettanomyces nanus
Pathway
bnn03030  DNA replication
bnn03410  Base excision repair
bnn03420  Nucleotide excision repair
bnn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOA43_002369
   03410 Base excision repair
    FOA43_002369
   03420 Nucleotide excision repair
    FOA43_002369
   03430 Mismatch repair
    FOA43_002369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bnn03032]
    FOA43_002369
   03036 Chromosome and associated proteins [BR:bnn03036]
    FOA43_002369
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_002369
DNA replication proteins [BR:bnn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    FOA43_002369
  DNA Replication Termination Factors
   ELG1-RFC complex
    FOA43_002369
Chromosome and associated proteins [BR:bnn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    FOA43_002369
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     FOA43_002369
  Check point factors
   HRAD17(Rad24)-RFC complex
    FOA43_002369
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA AAA_33 AAA_30 AAA_16 DUF87
Other DBs
NCBI-GeneID: 62195770
NCBI-ProteinID: XP_038778594
UniProt: A0A875S5J5
LinkDB
Position
2:796696..797841
AA seq 381 aa
MSLWADKYCPRTLDDLTYHEEISKKLKKLSSSGDFPHLLVYGPSGAGKKTRVMVLLRELY
GSGAEKLKVDVKTFQTPSGRKLEFNVISSPYHLEITPSDMGNNDRIVIQDLLKDVGQTES
IDFAGLLHNDDKKIVSNNKKKFKVVVINEAELLSRDAQAALRRTMEKFSANIRLILVCNS
TSSIIDPIKSRTLAVRVGLATFKETSDVFQNILKHEHMADSSFPEDEVERQASFQKVYES
AEGNLRMGIMMLEALYMNNEHVTCSTAMIRPDWQLVIDELARGIIKDRSVGKLQHTRSVL
YELLAHAIPANLILKRLTLQLWHDLGEFAALKNKDETLTKVVDAASTFDERLSLGSKDIF
HLEGFITRVMVIVEEELNGRT
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcactttgggccgacaaatactgtccaagaaccttggatgatcttacttatcatgaa
gaaatttcgaagaaattgaagaagctttcgtcgtcaggagacttcccacatttactagtc
tatggacctagtggagcaggtaaaaagacgcgtgttatggtacttcttagagagttgtac
ggttcaggagcagagaaattaaaagtggatgtgaaaacgtttcaaacgccaagtggtagg
aaattggaattcaatgtgatctcatccccgtaccacttggaaattactcccagtgatatg
ggtaataacgatagaattgtaatacaagatcttttgaaggacgtgggacaaactgaaagt
attgactttgcaggtttattgcacaacgatgacaagaaaattgtgagtaataacaaaaag
aagttcaaagtggttgtcattaacgaggcagagctattgagccgagatgctcaagcagca
ttgaggcgaaccatggagaagttctcggcaaatattcgtcttattttggtatgcaattct
acatcgagcatcatcgatccaatcaaatcgcgtacccttgccgtcagagtgggtttggcc
actttcaaagagactagtgacgtatttcaaaacatattgaagcatgaacatatggctgat
agttcttttcccgaagatgaagtggaaagacaagcttcattccagaaggtgtatgaatca
gctgagggaaatctacggatgggtattatgatgctcgaggcattgtacatgaataacgaa
catgttacatgtagtacggcgatgattaggccggactggcagctcgttatagatgagctg
gcaagaggaatcatcaaagatcgaagcgttggaaaacttcagcatacacggtcagtttta
tacgagttattggcacatgccattcctgccaatttgattttgaaaagattaacattacaa
ctctggcatgatttgggggaatttgctgccttgaagaataaagacgaaacgttgaccaaa
gtggtggatgcagcatccacttttgatgaaagattgtcacttggatccaaagacatattc
catttagagggattcatcactagagttatggtgattgtggaggaggaattgaatggacgt
acatga

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