Brettanomyces nanus: FOA43_002416
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Entry
FOA43_002416 CDS
T07002
Symbol
TIF1
Name
(RefSeq) translation initiation factor eIF4A
KO
K03257
translation initiation factor 4A
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_002416 (TIF1)
03012 Translation factors [BR:
bnn03012
]
FOA43_002416 (TIF1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bnn04147
]
FOA43_002416 (TIF1)
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FOA43_002416 (TIF1)
mRNA cycle factors
Stress granule specific factors
FOA43_002416 (TIF1)
Translation factors [BR:
bnn03012
]
Eukaryotic type
Initiation factors
eIF-4
FOA43_002416 (TIF1)
Exosome [BR:
bnn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FOA43_002416 (TIF1)
Exosomal proteins of bladder cancer cells
FOA43_002416 (TIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Flavi_DEAD
UvrD-helicase
TniB
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
62195817
NCBI-ProteinID:
XP_038778641
UniProt:
A0A875S106
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All DBs
Position
2:899473..900810
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AA seq
445 aa
AA seq
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MSEETTPVAPIAETIETTEKTPVTEVDAAAAAPADAAAPVEAAAPKEHENITAGPQIDAN
GMETNYDKIVYTFDELNLKPEILRGIYAYGYEHPSAIQQRAIAPIIEGRDVLAQAQSGTG
KTATFAIAALQNIDEKLKETQALIIAPTRELAMQIQKVVLAIGMHLDITVHASIGGKAVS
DDIEALKKGAQIVVGTPGRVYDMIERGFFRTENVKMFIMDEADEMLSSGFKEQIFNVFRF
LPQETQVVLLSATMPQDVLEVTSKFMRNPIRILVKKDELTLEGIKQFYVDVDEEEFKFDC
LCDLYASISVTQAVIFCNTRRKVEALTEKLIENKFTVSAIHADLSQQERDTIMTEFRTGS
SRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINLLAKNDIP
AMREIEKFYSTQIIELPANISELFD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaactacgcctgttgctccaatcgccgagacgatcgagacaactgagaag
acaccagttactgaagttgatgctgctgctgctgctcctgctgatgctgctgcccccgtt
gaggctgctgctccaaaggaacatgaaaatattactgctggtcctcaaattgatgccaac
ggaatggaaactaactacgataagatcgtctacaccttcgatgagttgaacttgaagcct
gagatcttaagaggtatctatgcttatggttatgaacatccttctgccattcagcagagg
gccattgcacctattattgagggccgtgatgttcttgctcaggctcaatctggtaccggt
aaaacggcaaccttcgccattgctgccttgcagaatattgatgaaaagttgaaggagact
caggctttaatcatagctccaacccgtgagttggccatgcagattcaaaaagtcgtcttg
gctattggtatgcatttggacattaccgtccacgcttccatcggtggtaaagccgtgtca
gacgatatcgaggcactcaaaaaaggtgcccaaatcgtcgtcggtactccaggtagagtc
tatgatatgattgagagaggattcttcagaacagagaatgttaagatgttcattatggat
gaggctgatgaaatgttgtcgtcaggattcaaagaacagatctttaatgtgttcagattc
cttcctcaagagacacaggttgttctattgtctgcaactatgccccaggatgtcttggaa
gttacttccaagttcatgagaaacccaatcagaattttggtcaagaaggatgagttgacc
ttggaaggtatcaagcaattctatgtggacgtggacgaagaggagttcaagtttgactgt
ttgtgcgatttgtacgcctccatctcagttacacaggccgtcatcttctgtaacaccaga
agaaaggttgaggctcttacggaaaagttgattgaaaacaagttcaccgtctctgctatt
catgctgatctttcccaacaggaaagagacactattatgactgagttcagaacgggttct
tctagaatcttgatctctaccgatcttttggctagaggtatcgatgtccaacaggtgtcc
ttggttattaactacgatttaccaaccaacaaggaaaactatatccacagaattggtaga
ggtggtagatttggtcgtaagggtgttgccatcaacttgttggccaagaatgacattcct
gctatgagagagatcgagaagttctactctacccagattatcgagttacctgccaacatc
agcgagttattcgattaa
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