KEGG   Brettanomyces nanus: FOA43_002479
Entry
FOA43_002479      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bnn  Brettanomyces nanus
Pathway
bnn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOA43_002479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bnn03041]
    FOA43_002479
Spliceosome [BR:bnn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    FOA43_002479
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_TEP1_C PRP4 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_like WD_LRWD1 Beta-prop_NUP159_NUP214 KNTC1_N WDR54 Beta-prop_Nup120_160 SHMT
Other DBs
NCBI-GeneID: 62195880
NCBI-ProteinID: XP_038778700
UniProt: A0A875S437
LinkDB
Position
2:1028228..1029517
AA seq 429 aa
MEKLTDVNKLVPTIDEEVKSILHQLEQPITRFGEGPGERRERLIELVSSDEKARNAMIKL
QESSSDDLMSDLDNEEFYTPGTDDVFQIRSSIADDSLRRAQRRVLGQHQLYTTTDPLENL
KSRRAYYKGLKSCLQLEGSQIVSNRFTSAVQFSPDDSLIAAASWNGSCYIYDSKTLDLKH
TFKDLLSEKVSALDWMPDSTAKRLATGGAAGKIKLVDLENRSDGELDGHQGRITDVQFHP
ICKYLCSSSYDLTWRLWDLEKMQEIYYQEGHSKELTVLKIHPDGSLLASAGLDAMVRVWD
LRTGRSIAVLSNNGHIKAVHAMDWRPSGFQLITGGADNNLKVWDLRKSNSSAAETVLAHS
KMITDVKVASNDKYFVSCGYDGYLDVISCDNFVTIKKFKNIDKLMTCDVSHDSKRIITGG
WDRSLKLYQ
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggaaaaactcacggacgtcaacaaattagtaccgacgatcgatgaagaagtcaagtcg
attctccatcaactcgaacaaccgataaccagattcggcgaaggccctggtgagagacgt
gaaaggcttattgagttagtgagtagtgatgagaaggccagaaatgcgatgataaagttg
caagagtcatcttctgatgaccttatgtcggatctggataatgaggagttttatactcca
ggtacagacgatgttttccaaataaggtcttctatagctgatgactctcttcggagagcc
cagagaagagttttggggcagcatcaactatacacgactacggatccgctagaaaacttg
aagtctcgaagagcctattataaaggactcaagagctgtttacagcttgaagggtcacag
attgtatctaaccgattcacttcggctgtccagttttctcctgatgactccttgattgct
gctgcttcttggaatggcagctgttatatatatgattctaagactcttgatttaaagcat
actttcaaggatttactctcggaaaaggtgtctgcattagactggatgcctgatagtaca
gccaaacgattggctaccggaggtgcagccggtaaaatcaagttggttgacttagaaaac
cgatcagatggagaacttgatggtcatcagggtagaattactgatgtacagtttcatccc
atttgcaagtatctttgcagcagttcttatgatctgacatggagattatgggaccttgaa
aagatgcaggagatctattatcaagagggtcattcaaaggagttgaccgttttaaaaatt
catccagatggctctttattagccagtgcgggtcttgatgctatggtaagagtctgggat
ttgagaacgggtcgttctattgccgtgttaagtaataacggtcacattaaagctgttcat
gctatggattggcgacctagtggtttccagttgatcactggtggtgctgataacaacttg
aaggtttgggatcttaggaagagcaattcttctgctgcagaaaccgtcttggcacactca
aagatgatcacagatgttaaagtggcttccaacgataagtattttgtctcgtgtggctat
gacggttacttggacgtaatatcctgtgataattttgtcaccattaagaagtttaagaac
atcgataagttgatgacctgtgatgtaagtcatgatagtaagaggattattactggagga
tgggatagatccttgaaactgtatcaataa

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