Brettanomyces nanus: FOA43_002539
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Entry
FOA43_002539 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bnn
Brettanomyces nanus
Pathway
bnn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOA43_002539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_002539
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
FOA43_002539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
62195940
NCBI-ProteinID:
XP_038778754
UniProt:
A0A875S624
LinkDB
All DBs
Position
2:join(1141898..1141906,1141955..1143682)
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AA seq
578 aa
AA seq
DB search
MLSTPFEGNSLHWVKMSQNVQVKKEDNAKIEDAPQFDCFPLRACTKEDIEETRYHIMKFH
SVKRVDPLKDFEQPTRLHRKDPKNFQFQMSMKELEQKTIDDRERDIERVEKRKEYMENKG
IKPTELSQEQIDEKIELDGMSDEERAQRLDEKKREEDEIKRKQEKENQMKLVAPDGGARK
TKRQVLKKKTRQIRAYDETKRRLRYEEFYPWVLEDYDAKQAWVGNYEAGNTDNYCLLVLD
NANKCFKLVPLEKYYRFTPRNKYATLTLEEAEAKMNKGNTGQRWLMRKMAEEVANGQRVD
LRYRKFKTTSRPHHEDTEDGKKTDDEDMDYDDEFQDDEEAPIMEGNEEENKLVEGKMKKN
MLRANNLIEHSDEDESDIDDLFETRKVDKEGKKLRKALVQNAMNEVYDTDDEENNPYLSD
SEIEKDDSDEDEDKIITIKKEAGADGKLEETVTVKKEGEEGLGGAKQIFVLKASDGVVTL
RIPKTILSQFREGEWNPETAVRRNLKRKSPSPSPKAGESYEISKSDVDELIKDGPISLTT
LVRSLKMKMSKDPNARTNLKKVLKESFVLKNKKVYKRL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcactccttttgaaggcaacagtttacactgggttaagatgtctcaaaatgtt
caggttaagaaagaagataatgctaagatagaagatgcacctcagtttgattgctttcct
cttcgagcatgtacaaaagaggatatcgaagagacgaggtatcatattatgaagttccat
agcgtgaagagggttgatccattgaaggattttgagcagcccacgagattacatagaaag
gaccctaaaaactttcaatttcaaatgtctatgaaggaattagaacagaagacaattgat
gatcgtgagagagacatcgaaagagtagagaagagaaaggaatatatggaaaataagggt
attaaacccactgaactatcacaggagcaaatcgacgagaaaattgaattggacgggatg
agtgatgaggaaagggcacaaagattggacgagaagaaaagagaggaagacgaaatcaag
agaaagcaggaaaaggagaaccaaatgaagttagtggcaccagatggaggtgccagaaag
accaagaggcaggtcttgaagaaaaagacaaggcagattagggcttatgatgagaccaag
agaaggttgagatacgaggagttttatccatgggttctggaagattatgatgccaaacaa
gcatgggttggcaattatgaggctggcaatacagataactactgcttacttgtattggat
aacgctaataagtgttttaagctggttcctttagagaagtattataggtttactcctcga
aataagtatgctacattgacattggaagaggcagaggctaaaatgaacaaaggaaacacg
ggacaacgatggctgatgaggaagatggcagaagaggttgccaatggacagcgtgtggat
ttacgttatagaaagttcaagacgacgtcaaggcctcatcatgaagatacagaagatggt
aaaaagacggacgatgaagatatggattatgatgatgaattccaagatgatgaagaagca
ccaattatggaaggaaacgaagaggagaacaagctggttgaaggtaagatgaagaaaaat
atgctacgagccaacaatttgattgaacatagtgatgaagatgagtccgatattgatgat
ctatttgaaaccagaaaggttgataaggagggtaagaagttacgaaaggccttggttcag
aacgctatgaacgaggtgtatgatacagacgacgaagaaaacaatccatatttgtcagac
agtgagattgagaaggatgatagcgatgaagatgaggataaaattatcactatcaaaaag
gaggccggagctgatggtaagctcgaagagacggtgacggtgaagaaagaaggagaagaa
ggacttggaggtgcaaaacagatttttgtattgaaagcatcggatggtgttgtcactttg
agaataccaaagactattctctcccaattcagagaaggtgaatggaaccctgaaactgct
gttcgaagaaacctcaagagaaagtctccgtcaccaagtccgaaagctggagaaagctac
gaaatttccaaatctgacgttgacgaactcatcaaagatggacctatttcacttacaact
cttgtgagatcattaaagatgaaaatgagcaaagatcctaatgctaggaccaatttgaag
aaggtgttgaaagaaagctttgttcttaagaacaagaaggtttacaaaaggctgtga
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