Brettanomyces nanus: FOA43_002544
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Entry
FOA43_002544 CDS
T07002
Symbol
DBP3
Name
(RefSeq) RNA-dependent ATPase
KO
K14811
ATP-dependent RNA helicase DBP3 [EC:
5.6.2.7
]
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_002544 (DBP3)
Enzymes [BR:
bnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOA43_002544 (DBP3)
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
Pre-60S particles
Helicases
FOA43_002544 (DBP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
AAA_22
HEPN_AbiA_CTD
DUF677
Motif
Other DBs
NCBI-GeneID:
62195945
NCBI-ProteinID:
XP_038778759
UniProt:
A0A875S7R2
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All DBs
Position
2:complement(join(1158623..1159702,1159729..1159737))
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AA seq
362 aa
AA seq
DB search
MSLTLGFGIPAVNHVVKSGSQDLKVLVISPTRELATQTYENMKELTDAVGLHCVCIYGGV
PKESQRREVKRSQCVIATPGRLLDLIQEGSISLKQVDYLILDEADRMLEKGFEEDIKNIV
SQTNAQRQTLMFTATWPREVRDLASTFMDQPAKVSIGDRDELSANKSIKQIVEVIDPREK
KTKLLQLLDKYLVGSKKHDRILIFALYKKEAARVERDLTYHGYEVAALHGDLSQAQRTQA
LDSFKSGKCNLMLATDVAARGLDIPNVKVVINLTFPLTAEDYVHRIGRTGRAGHTGIAHT
LFTIEEKHLAGALMNVLRAANQPVPDELLQFGSYTKKKTHSAYGAFYKDVDMHEKGKKIK
FD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgactttaggatttggtattccagccgtcaaccatgttgttaaatctggcagt
caggatttgaaagtgttagttatttctccaactagggaattggcaacgcaaacctacgaa
aatatgaaagagttaaccgatgctgttggcttgcactgtgtctgcatatatggcggtgtt
cctaaagaatcacaacgtagagaagtgaaacggtctcagtgtgtgattgcaactccagga
agattactagatcttatacaggaaggctcgatcagtctcaaacaagtggattatttgatt
ttggatgaggcagatcgtatgttagagaaaggatttgaagaggacatcaagaatattgtg
tcgcaaacgaatgcacagcgtcagactttaatgttcacagctacctggcctagagaggtg
cgtgacttggcatccacatttatggatcagccggctaaagtttctatcggagatcgtgat
gagctttctgccaataagagtattaagcagatcgtggaagtgatagatcctagagagaaa
aagaccaagttgctgcaacttctcgataaatatcttgtcggtagcaagaaacatgatagg
attttaatctttgccttgtacaagaaggaggcggctcgtgttgagagggatttgacctac
cacggctacgaggtggcagcattacatggagatctcagtcaggcacaacgtacgcaggct
ttagacagttttaagagtggtaaatgcaaccttatgttggcaacagatgtggcagcccgt
ggtttggatattccaaacgtgaaggtagtgatcaatttgaccttccccttaactgctgag
gattatgtccatagaatcggtagaactggtagagcaggacacactggtattgcacacact
ttgttcaccattgaagaaaagcatcttgccggtgctttgatgaacgttctgcgagcagca
aatcaacctgttcccgatgaattacttcaattcggttcttacactaaaaagaagacccac
agtgcatatggtgctttctataaggatgtggatatgcatgaaaagggaaagaagatcaag
ttcgattag
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