KEGG   Brettanomyces nanus: FOA43_002556
Entry
FOA43_002556      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K12828  splicing factor 3B subunit 1
Organism
bnn  Brettanomyces nanus
Pathway
bnn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOA43_002556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bnn03041]
    FOA43_002556
   03036 Chromosome and associated proteins [BR:bnn03036]
    FOA43_002556
Spliceosome [BR:bnn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    FOA43_002556
 Complex B
    FOA43_002556
 Complex C
   U2 SnRNP specific factors
    FOA43_002556
Chromosome and associated proteins [BR:bnn03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    FOA43_002556
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 Htt_N-HEAT_1 RRP12_HEAT Spore_YhaL
Other DBs
NCBI-GeneID: 62195957
NCBI-ProteinID: XP_038778771
UniProt: A0A875S1F5
LinkDB
Position
2:1187962..1191288
AA seq 1108 aa
MSKVSTPGSVKGVVPYSRKDDDPKVKASYTMPKEIVEKIDKEAQSSESLDVLQQRIKERK
LESSENDYKKRKYELFKEATENKTYSQTVKKRKEEKEAEDEFIETQGNATPPRDKTPPRR
ERKKRWDVRPEDSGKLNSAAVGRPSRWETDEKEKEEDDKKALILGKVPVVDGIELNDQNL
TLLLPPGFKKVPVPSEYTPSSLDMPDFSSFNPQTNVAGYMIPEVSSYKDVQTQMAVNPQL
IHEVPGIKDLKYFKDSDMAVFHKLISTRDIPDSQLSVLDKKERNCMKMILNVKNGSSQSR
RVAMRQLTENASSFGPEILFDILLPLLMTKTLEEQERHLLVKMVGRVLFVLDDLVKPYSK
KILVVMMPLLMDENLYSKLEGREVISNLSKAVGLAHMIFTLRPDIDHPDDYMRNLVSRTF
AVVTSSLGVKSVLPFLKAVCNSKKSWLARHTGVRIVSQIALLMGPTILPYLNQLVRCVLR
NIDDDNLSVRTMAANTISVLAEASKPYGFESLEPAIEPLWKGLKQNRGRNLAAFLRALGS
LIPLMDEEYANYYAREVFRVISREFDSPDDRMKIAILKIIEECCSLETIDKKLVLEGDFL
DDFFSSFWTRRAAMDRRISSICVDACYAISLKAGSGDIVGRALVSLKDESESFRRMAICT
VDRIVSAQGSFELDDRAVNRLLDGLLYSLQNQSEGADKVVLKGFGDVLNSLGMRAKPHLM
PIVSALLYRLKNKDESIREQAADMISKVAPVLKVCGEDEMLIRLGTILYESLGEVYPDVL
GSILGALRSVISSLNSLDLLNPPISQILATLTPILRNRHEKVQETTINLIGDIAERAKDY
INHREWMRISFEMLEMLKSSRKQIRISANKTFGLIAMNIGPSDVLVTLLNNLRVQERQLR
VCTAVAIGIVAETCLPYTVLPAMMNEYRYPDKNVQNGILKALSFMYEYIGGLGSDYIYAI
TPLLIDAFGDRDIIHRQTASTVVKHMALGSIGQGYEDAFMNFLNYLWPNVLDTSPHLITR
VIDAVDSLRMVLGCGVLMNYVLAGLFHPARRVRAAYWRIYNTMYVNAADSMVPYYPRFEA
VGVEIQAKEAEIDLNPRDLGVSELDIWV
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgtcaaaagtatcaacgcctggatctgtgaaaggagttgttccttattcacgtaaggat
gacgatcctaaggttaaggcgtcgtatactatgcccaaagagatagtagaaaagatagat
aaagaagcacagtcttcagagtctttggatgtgctacaacagcgaattaaagaacgaaag
ttggaatcatctgagaatgactataagaagagaaaatatgagctgtttaaagaagctact
gagaataagacgtatagtcaaactgtgaagaagaggaaagaagagaaggaagctgaggat
gagttcattgaaacacaaggtaacgctacaccccctcgtgataagacaccgccaagacgg
gagagaaagaaaagatgggatgttcgacctgaggattccgggaagctgaatagtgctgct
gtagggagaccttcacggtgggagacagatgaaaaggagaaggaagaagacgataaaaag
gctttaattcttggcaaggttcctgttgtcgatggaattgagttgaatgaccaaaacttg
acacttttacttcctcctggattcaaaaaagtgccggtgccgtctgaatacactccttcg
tcgctggacatgcccgatttctcgtctttcaaccctcaaaccaacgtagccggatatatg
attcctgaagtgagtagctacaaagatgttcagacgcagatggccgtgaaccctcaactt
atacacgaagttcccggaattaaagatttgaagtacttcaaagattcggacatggcagtt
ttccacaagcttataagcacacgggatatcccggattcacaattgtctgttcttgacaag
aaggagagaaactgtatgaaaatgattctcaacgtgaagaatggatctagtcagtctaga
agagttgccatgagacaactcaccgagaatgctagcagttttggaccagagattctgttc
gacattcttctacctttgctaatgactaagactttagaagaacaggagaggcatcttttg
gtgaagatggtgggccgcgtgttgtttgtccttgatgacttggtgaaaccttactcgaag
aagattcttgtagtgatgatgccactgcttatggatgagaacttgtatagtaaacttgaa
ggacgcgaagtgatctcgaacttatctaaagccgttggactagcacatatgatatttacc
ttgagacctgatatagaccatccagatgattacatgaggaatttggtttcacgtacgttt
gctgtggtgacttcttctttgggcgttaagtctgtgcttccatttctcaaagcggtttgt
aattccaagaagagttggttggcacgacacactggtgttcgaatagtttctcagatagca
ttgttgatgggtcctacaattctaccatatttgaaccaacttgttagatgtgtgttacgg
aatatcgatgacgataacctgtccgtgagaaccatggctgccaacaccataagtgtcttg
gcagaagcctctaagccttatggatttgaatcattagaacctgccattgaacctctttgg
aaaggtttgaagcagaatagaggtcggaatttggccgcgttcttaagagcattgggatca
ttgataccattgatggatgaggagtacgcaaattactacgccagagaagtgtttagagtg
atttccagagaatttgactctcccgatgaccgaatgaagatcgccattttgaagatcatt
gaggagtgttgctctctagagacgatagacaagaaattggtactagagggtgattttttg
gatgatttctttagtagcttctggactagacgtgctgctatggataggagaatttcgagt
atatgtgtagatgcctgttatgctatttctttaaaggcagggagcggtgacatagtggga
agagcactagtatctttgaaggacgaatctgaatcttttagaaggatggctatctgtacc
gtggatcgtattgtgagtgcccaaggaagttttgagcttgatgatagagctgtcaataga
ttattggatgggttgctttactcgttacagaatcaatccgagggtgccgacaaggtagtc
ctcaagggattcggtgatgttttaaatagccttggtatgcgagccaagcctcacttaatg
ccgattgtgagtgctcttctctaccggctgaagaacaaggatgaaagtattcgagaacag
gcagcagatatgatttcgaaagtggctcctgtgttgaaggtgtgtggagaagatgagatg
ttgattcggttgggtacaattctttacgaatctcttggagaggtttacccagatgttcta
ggatcgattcttggagcattgagatctgttatctccagtctaaacagtttggacttattg
aatccacctatttcacagatattggctactttgactccaattctcagaaatcggcatgag
aaggtacaggaaacaacaataaatcttattggagatattgctgaacgtgccaaggattac
attaatcatcgggaatggatgagaatttcgtttgagatgttggagatgctcaaatcatcg
agaaaacagattcgtatttctgccaacaaaacgtttggacttattgccatgaacatagga
ccttcggatgtgctagtgacacttttaaataacttgagagttcaggagaggcaattaaga
gtgtgtactgccgttgctataggtattgttgccgagacatgccttccgtacacggtgctc
ccggctatgatgaacgagtatcgatatcctgacaaaaatgttcagaatggtattctcaag
gctctttcgtttatgtatgaatacataggaggtctcggaagtgactacatctatgcaatt
actccgttactgatagatgcattcggcgacagagatataatccaccgtcagacagcgtcc
accgtggttaaacatatggcattgggaagtatcggacaagggtatgaagatgccttcatg
aatttcttgaactatttgtggcccaatgtgctggatacctcaccgcatttgatcacgagg
gtgatcgatgctgtggatagtttgagaatggtgttaggatgcggagtgttgatgaactac
gttttggccgggttgttccatccagctcgaagagtcagagctgcatattggaggatctac
aatacaatgtatgtgaatgcagccgatagtatggttccatattatccgagatttgaggct
gtgggagtggaaatacaggcgaaagaggctgagattgatttgaatccgagggatttgggg
gtgtccgagttggacatatgggtgtag

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