Brettanomyces nanus: FOA43_002725
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Entry
FOA43_002725 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K11762
chromatin structure-remodeling complex subunit RSC8
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_002725
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_002725
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
FOA43_002725
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
FOA43_002725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Chordopox_RPO7
Motif
Other DBs
NCBI-GeneID:
62196126
NCBI-ProteinID:
XP_038778937
UniProt:
A0A875S5S0
LinkDB
All DBs
Position
3:complement(join(166770..168442,168632..168662))
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AA seq
567 aa
AA seq
DB search
MSEKASEDPVDIDQKIRQLEEDAQKFIAKQSKPVIIPSYAKWFDMNKIHDIEKRSLPEFF
AVESRFKTPKVYKEMRDFMINTYRLNPLEYLSVTAARRNLAGDVASIMRIHGFLMKWGLI
NYQIDPKTKSFRTGPQYTGHFQITLDKPTGFEPFIPEGADIKVAGDVDHTTDVASTDEPP
LKKQKTSPSLKVDEIPLNLELRHNIYDSTQDAFTLRNEETSKNTKFAGIKQLYCSITGND
ITETRYHNLKSKQNISSRAFEDGQFPSTFKSADFVKLDKIQAESDSRPWSDQEILLLLEA
IEMYGNNWNSICGHVGSRTKEQCIAKFIQLPIEDRYLEKQLSKETYLDYLKRLKLGNGEV
SEDNHQEGIANGIHNAVSQLVSSVGDSVLTAEDLKKDGEASKAIKKAYGAIMGNCDAKSE
IELRKQDGLISSILELSLKKFDQKMEQLKALESQVLEEKRSLALEKHNLLIDRLSLRKQA
LAVRTKLIEASDLGATDEGLQLCEEAVFEANRAPRIVVSKKNELITSNEQEGDDDNDSSI
PDGDKQDEGKVQPISVMEPQKYSMWSA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaagcctctgaagatcctgtggacattgatcagaagatcagacagcttgaa
gaggatgcccagaagtttattgcaaagcaaagcaagccggttattattccctcgtacgcc
aaatggtttgacatgaacaagattcatgatattgagaagcgatcgttaccggagttcttt
gccgtagagtctcgattcaagactcctaaggtttacaaggaaatgagagattttatgatc
aacacataccgattaaatcccctggaatatctctctgtcactgctgctaggaggaacttg
gcaggagacgtagcctctattatgaggattcatggatttctgatgaagtgggggttgatc
aattatcagatcgatcctaaaactaagtcattccgtacaggtcctcagtataccggacat
ttccagatcaccttggataagcccaccggatttgagccgttcattccagaaggagcagac
attaaggttgcaggtgatgttgatcatactactgatgtcgcttctaccgatgagccacct
ctcaagaaacagaagacatctccttcgcttaaagttgatgaaattcctctcaacttagag
ctaagacataacatctacgactctactcaggatgcgttcacattgcgcaatgaggaaact
agtaagaacaccaaatttgctggaattaaacagctttactgtagcattactggtaatgat
attaccgaaacaaggtatcataacctcaagagtaaacaaaacatttcatcgcgtgcgttt
gaggatggtcagtttccttcgactttcaagagcgctgattttgtcaaattggacaagatt
caggctgaatctgattcacgtccttggtcagatcaggagatattgcttttattggaagct
atagaaatgtatggaaataactggaattccatctgtggtcatgttggttctaggaccaag
gagcagtgtatagcgaagtttattcaacttcctattgaagatagatacttggagaaacag
cttagtaaggaaacttatctggattatttgaagagactcaaactcgggaacggcgaggtt
tcagaggacaaccatcaggaaggcattgccaacggtattcataatgcagtgagtcaactt
gtgtcgagtgttggtgattcggtgttaacagcagaagatttaaagaaagatggagaagct
agtaaagcaatcaaaaaggcttatggtgcaataatgggaaactgcgatgccaagtcagaa
atagaactcagaaagcaagacgggttgatttcatcaatattggagctttctttgaagaag
tttgatcaaaaaatggaacaattgaaagccttagagagccaggtgttggaagaaaagcga
agtttggctctggaaaagcataatttacttatagataggctttctctgagaaaacaggca
cttgcagtgaggacgaaattgatcgaagcaagcgatcttggtgccacagatgagggacta
caactctgtgaagaagctgtttttgaagccaatcgggctccaagaatcgtagtgagtaag
aagaatgagttaataacatcgaatgagcaagaaggagatgacgataacgacagcagtatt
cccgatggggataagcaggacgagggtaaagttcagcctatcagtgtcatggaacctcag
aagtattcgatgtggagtgcttaa
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