Brettanomyces nanus: FOA43_002806
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Entry
FOA43_002806 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_002806
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_002806
Enzymes [BR:
bnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOA43_002806
Spliceosome [BR:
bnn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
FOA43_002806
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
Pre-60S particles
Helicases
FOA43_002806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
62196207
NCBI-ProteinID:
XP_038779016
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All DBs
Position
3:346799..349144
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AA seq
781 aa
AA seq
DB search
MSVTKLAKEISTRFASLEFIPTISDSETEEIPDLDDDNDNEKKTDGEDDEEEEDSEVGKD
ETAKIAKTDKKKKKKKSKKSKNQEDQEQNEAGDLNPDFTFDLGDDLDTNGFEGWDFDPEE
GKEKEEKKDVDLDSIIKRKGGLSGKLSVNEEPKKPEDVLEKEEKDDSDDDELAMDGFGMG
AKGQEEKKNEEKMAANDKNNNDDDDDDDDGGFDATINALYDTADQDEDEEEKQKDSAKAI
EKFYDSHEGESAQKTLYKDFQSLNLSRPVLKGLSALGYSKPTPVQSASIPIALMGKDIVA
GAQTGSGKTAAYMIPIVERLLYKPTKVSSTRVVILAPTRELAIQVADVAKRVSRFVGGIT
IGMAIGGLNLRRQEQELKTRPDVVIATPGRFIDHVRNSPSFNVDSVEILVLDEADRMLEE
GFHSEITEILELVPQKRQTLLFSATMNSSISDLIQLSLRKPVRIMIDPPKAAAAGLLQEF
VRIRKRETLKAALLFSILSKLDSAEQIRIMVFVATKNMAHRLRIIMGLLGLKVSELHGAL
TQDQRLKSITDFRKLTVPILICTDLAARGLDIPKIEVVINFDMPKSHEIYLHRVGRTARA
GREGISISFVGEAVRERRIVRESIKQVETAHSGKAVGRKVNWDDVEKINDVIEGKREVIK
DILEEEKGEKEMIQAEMELKKGENLLRYKEEIQSRPRRTWFQSEREKKEEKVIGAMGKLK
KITSKKRKAEEARESDNGSNGRSYKKTKRDRIEDQSGERRKKEITKKKQKKRAKKARKRM
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaactaagctagcaaaagagatatcaactaggtttgcatctcttgaatttatt
cctacgatttctgacagtgaaactgaagaaattccagatttggatgacgataatgataat
gagaaaaagacagatggagaagatgatgaagaagaagaagatagcgaggttggcaaagat
gagactgctaagatagcgaagactgataagaagaagaagaagaagaagagcaagaaaagt
aagaatcaggaggatcaagaacagaatgaggctggagatttgaatcctgattttaccttt
gatctgggtgatgatttggatactaacggatttgaaggatgggactttgatcctgaagaa
ggaaaagaaaaggaggagaaaaaagatgtagatttggatagtattattaagagaaaggga
ggattatcaggaaagttgagtgtgaatgaagaaccgaagaaaccggaggatgtcttagaa
aaggaagagaaggatgactctgatgatgatgaattggccatggatggatttggaatggga
gcaaaagggcaagaagaaaagaaaaatgaagagaaaatggcagcaaacgataagaacaat
aacgatgacgatgatgatgatgacgacggtggttttgatgccaccataaatgcattgtat
gacacagcggatcaggatgaagatgaagaagagaaacaaaaagattctgctaaagctatc
gaaaagttttatgatagtcatgaaggagaatctgcacaaaaaactctctataaggacttt
caatcgctgaacttgtcaagaccagtgctcaaaggtctctctgcattaggatactccaaa
ccaacacctgttcaaagcgcatctattcctattgcacttatgggtaaagatattgttgca
ggagcacaaacaggttctggtaagactgctgcttacatgattcctatcgtggaaagacta
ttgtacaagcccacgaaagtatcatccacaagagttgtaatattggcacctaccagagag
ttggctattcaggtggctgatgtagcaaaaagagtttcacggtttgttggtggaatcact
attggtatggcaattggtggtttgaacttgagaaggcaggaacaagagttgaagacgaga
cctgatgttgttattgcaacgcccggtagattcattgatcacgtgaggaattctccctct
tttaatgttgattctgtagagattctcgttcttgatgaagctgatagaatgttagaggaa
ggtttccatagtgaaattaccgagattcttgaattggttccgcagaaaaggcagactttg
ttgttttctgccaccatgaattctagtattagtgatttaatccaactttctctaagaaag
cctgtgagaatcatgatcgatcctccaaaggcagcagctgctggtttattgcaggagttt
gttagaataaggaaaagagagacattgaaagccgctttgttgtttagtatcctctctaaa
cttgattcggctgagcaaattcgtatcatggtatttgtggccaccaagaatatggcgcat
cgtctcagaattattatgggattgttgggcttgaaggtgtctgagttgcacggtgctctt
acacaagaccaacgtttaaaaagtatcacagattttaggaaattgacggtgccgattttg
atttgtacagacttggcagctaggggtttggatattccaaaaattgaagttgttatcaac
ttcgatatgccgaaatctcacgagatctatttgcatagagttggtagaactgctagagct
ggaagagaaggtatctctatttcgtttgtgggagaggctgttagagaacgtcgtatagtg
agagagtccataaagcaagtggaaacggcacattctggaaaggctgtaggaagaaaagtt
aactgggatgatgtggaaaagataaatgatgttattgagggtaaacgagaagtgattaag
gatattcttgaagaggaaaagggtgaaaaagagatgattcaagctgaaatggagttgaag
aagggtgaaaacttgttaagatacaaagaagagattcaatctaggcctagaagaacgtgg
ttccaatcggaaagagaaaagaaagaagaaaaagtgattggtgccatgggaaagttgaag
aagattacgagtaagaagcggaaggcggaagaggccagagaatctgataatggtagcaat
ggaagaagctacaaaaagactaaaagggatagaatcgaggatcagagtggagagagaaga
aaaaaggagataaccaagaagaagcagaaaaagagagcaaagaaggctagaaagagaatg
gattga
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