KEGG   Brettanomyces nanus: FOA43_002819
Entry
FOA43_002819      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
bnn  Brettanomyces nanus
Pathway
bnn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    FOA43_002819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bnn03019]
    FOA43_002819
Messenger RNA biogenesis [BR:bnn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     FOA43_002819
    U7-dependent histone pre-mRNA processing factors
     FOA43_002819
SSDB
Motif
Pfam: RRM_1 CSTF2_hinge RRM_10 DUF8400
Other DBs
NCBI-GeneID: 62196220
NCBI-ProteinID: XP_038779029
UniProt: A0A875S8P6
LinkDB
Position
3:complement(394777..395649)
AA seq 290 aa
MRPSKIIYITGIPYDKTEEQVLDIASSVGPVVSSKLLFDKDTGKSKGTCLVEYQDIETAS
SAVRNLNNYSISSDNGKGGRYLKCSFGSQDSILRLLQGDAWSGGGGYRSSPEQASKYELE
REIPPLPAGMNVGDSSMDGLNATIYQALTRMDRSRLQNLVRDAQLMSQGNSKLMQLLLNR
NPQLVYALVQSALLLNITSPDRIKDLLVDQEEAKLNSKLNSKPNSKTTVPVAPMVPVAST
DPPNHTLTPQQLEAIRAICSMSDDQITQQIADTQQQQLYLEIKRKYSGLS
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcggcctagtaaaattatctacatcactggaattccttatgacaaaacagaagaacag
gttctagatattgcgagctctgtgggtcctgtggtgtcgtcaaagcttctctttgataaa
gatacgggaaagtctaaaggtacatgtttggtggaatatcaagacattgaaacagcttcc
agtgcagttagaaatttgaataattattctatatcatccgataatggcaaaggtgggaga
tacttgaagtgcagctttggttctcaggattcaatactgagacttctacagggagatgct
tggtccggtggtggaggctatagatcatctcctgagcaggcgtccaaatatgaattggaa
cgggagattcctcctctccctgcgggaatgaatgttggagactcctctatggatggtctt
aatgctactatttaccaggctttaacacgtatggatagaagcaggctacagaatttggtt
agagatgctcaactcatgtcccaaggtaattccaagttgatgcaacttcttttgaataga
aatccccaattggtgtacgcgttggttcaaagtgctcttttactaaacatcacaagtcct
gatagaatcaaggatcttctggtggatcaagaggaggcaaagttaaactcaaagctcaac
tcaaagcccaactcaaagactactgttccagtggctccaatggttccagtggcttcgact
gatccaccaaaccacaccctgacacctcagcaactagaagccattcgagccatttgctca
atgtcagatgatcagattactcagcaaattgccgacacccagcaacagcagctgtatctt
gagattaaacgcaaatactctggcctctcataa

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