Brettanomyces nanus: FOA43_002877
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Entry
FOA43_002877 CDS
T07002
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
bnn
Brettanomyces nanus
Pathway
bnn03030
DNA replication
bnn03410
Base excision repair
bnn03420
Nucleotide excision repair
bnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOA43_002877 (RFC4)
03410 Base excision repair
FOA43_002877 (RFC4)
03420 Nucleotide excision repair
FOA43_002877 (RFC4)
03430 Mismatch repair
FOA43_002877 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnn03032
]
FOA43_002877 (RFC4)
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_002877 (RFC4)
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_002877 (RFC4)
DNA replication proteins [BR:
bnn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
FOA43_002877 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
FOA43_002877 (RFC4)
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
FOA43_002877 (RFC4)
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
FOA43_002877 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
FOA43_002877 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
Rad17
AAA_16
nSTAND3
Viral_helicase1
RCF1-5-like_lid
AAA_3
RuvB_N
AAA_assoc_2
DNAX_ATPase_lid
Mg_chelatase
NTPase_1
AAA_19
KTI12
AAA_11
AAA_24
ATPase_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
62196278
NCBI-ProteinID:
XP_038779087
UniProt:
A0A875S695
LinkDB
All DBs
Position
3:497880..498878
Genome browser
AA seq
332 aa
AA seq
DB search
MAETKYPLDLELPWVEKYRPKYLKDVVGNKDTIDSLERIAQEGNMPHLIISGLPGIGKTT
SILCLARELLNDDPKLMKDAILELNASDDRGIDVVRNQIKQFAQKKVSLPSNREKIIILD
EADSMTAGAQQALRRTMEIYSDTTRFAFACNQSSKIIEPIQSRCAILRFNRLQDEEILQA
LQRIVDREKIECTEDGLAALIFTAEGDMRQAINNLQSTFYGFQLVNAENVYKIVDSPHPL
LISKMLMLANEGKIEESLNILKELWNKGYSAIDIVTVSFRVMKTMYKLSENRRLELIRII
GFTHMRILEGVSTYLQLACMVGKIAKQINPAK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacgaaatatccgcttgatctagaactcccatgggtggaaaaatatcgtccc
aaatatctaaaggatgttgttggtaacaaggatacaatagactctctagagcgaattgca
caagaaggtaacatgcctcatttgattatctcaggattaccaggaattggtaaaacaacg
tctattttatgccttgcccgagaattattaaacgatgatccaaaattaatgaaggatgcc
atattagaattgaatgcttcggacgatcgaggcatcgatgttgtgagaaaccagattaaa
cagtttgcacagaagaaggtttcattaccatccaatagagaaaagatcattattttagat
gaagcagattcaatgacggcgggtgcacaacaggcattgagaagaacgatggaaatttac
tcggatacgacaagatttgcatttgcttgtaatcagagtagcaagatcatcgagcctatt
caaagtagatgtgctatattgaggttcaatagacttcaagatgaggagattttgcaagca
ttacaacgaattgtggatagggaaaagatcgagtgcacagaagatggcttggcagcactt
atttttacggccgaaggtgatatgagacaggctatcaacaatctacagagtacgttttat
ggcttccaattggtgaatgcagaaaacgtttataaaattgtggactcccctcatcccttg
ttgatttccaagatgttgatgttggccaacgaggggaaaatagaggagagtttgaatata
ttgaaggaattatggaataagggatactctgccattgatattgtcactgtcagctttaga
gtgatgaagacaatgtacaaattgagtgaaaatagaagattggaattgataaggattatt
ggatttacgcatatgaggatattggagggagttagtacgtatttgcagttggcctgtatg
gtgggtaagatagcaaagcagatcaacccagctaaataa
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