Brettanomyces nanus: FOA43_003023
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Entry
FOA43_003023 CDS
T07002
Symbol
RFC3
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10756
replication factor C subunit 3/5
Organism
bnn
Brettanomyces nanus
Pathway
bnn03030
DNA replication
bnn03410
Base excision repair
bnn03420
Nucleotide excision repair
bnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOA43_003023 (RFC3)
03410 Base excision repair
FOA43_003023 (RFC3)
03420 Nucleotide excision repair
FOA43_003023 (RFC3)
03430 Mismatch repair
FOA43_003023 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnn03032
]
FOA43_003023 (RFC3)
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_003023 (RFC3)
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_003023 (RFC3)
DNA replication proteins [BR:
bnn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
FOA43_003023 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
FOA43_003023 (RFC3)
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
FOA43_003023 (RFC3)
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
FOA43_003023 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
FOA43_003023 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
ResIII
Rad17
AAA_16
RuvB_N
AAA_assoc_2
AAA_14
AAA_22
AAA_11
DEAD
AAA_24
AAA_30
DUF815
Mg_chelatase
AAA_5
AAA_7
Viral_helicase1
RCF1-5-like_lid
ATPase_2
bpMoxR
nSTAND3
AAA_19
TIP49
AAA_25
AAA_3
AAA_18
AAA_28
RNA_helicase
KfrA_N
AAA_2
SRP54
AAA_33
DUF87
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
62196424
NCBI-ProteinID:
XP_038779230
UniProt:
A0A875S5N8
LinkDB
All DBs
Position
3:783825..784814
Genome browser
AA seq
329 aa
AA seq
DB search
MTNSLHENLPWVEKYRPQNLDQVYGQQEVVQTIRKLAKDGRIPHMLFYGPPGSGKTSTVI
ALAREIYGKNYKNMVLELNASDDRGIDVVRDRIKSFASTRQIFSSGFKLIILDEADAMTS
TAQNALRRIIEKYTKNTRFCILANYAHKMNPALMSRCTRFRFAPLADSAVGKGIHVVVKE
EKLNLPEETEKCLIPLSRGDMRKAFNVLQACAAALDEEGDPITIDMIYECVGAAKPKSIE
TVLDAIMKNDWTDAYGTMDKVRKAEGLALIDLIEGFVEVLDKYQLKPSTRTSILEGLGDI
EYGISKGGSDKIQSTAVIGCIKSSLENEQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattctctacatgaaaatcttccttgggtggagaaatatagaccacagaacttg
gatcaggtttatgggcaacaggaagttgttcaaacaattcgaaaacttgccaaggatgga
cgtattccgcatatgctattctacggacctccaggaagtggcaagacatccacggtgatt
gcattggcaagagaaatatacgggaaaaattataaaaatatggtgttggagttaaatgcc
tcagatgatcgaggaattgacgttgtaagagacaggatcaagagttttgcaagtactaga
cagatcttcagctctggattcaagttgattatcttggatgaggcagatgcgatgactagc
acggctcagaatgcgttgagacgaattattgagaagtacactaaaaatacaaggttctgc
attttggccaattatgcacacaaaatgaatcctgcattaatgtccagatgtacgaggttt
cggtttgctccgttagcagattcggccgtggggaagggaattcatgtggtggtgaaggaa
gagaagttgaatctaccggaagaaacagagaaatgtctcattcctttgagtagaggcgat
atgagaaaggcgtttaatgttcttcaagcttgtgctgcagcccttgatgaggaaggtgat
cccataacgatagatatgatctatgaatgtgtaggagccgccaaacccaaatctatagag
actgttttggatgctattatgaaaaacgattggactgatgcctatggtacgatggataag
gtgaggaaagccgaaggattggcattaatagatctcatagaaggattcgttgaggtgctg
gacaaatatcagcttaaaccatctacgaggacgagtatattggagggattgggagatatt
gaatacggaatatccaaaggtggtagtgataagatccaaagtactgcggtgataggatgc
atcaagagttctttagaaaatgagcagtag
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