KEGG   Brettanomyces nanus: FOA43_003188
Entry
FOA43_003188      CDS       T07002                                 
Symbol
RCL1
Name
(RefSeq) rRNA-processing endoribonuclease
  KO
K11108  RNA 3'-terminal phosphate cyclase-like protein
Organism
bnn  Brettanomyces nanus
Pathway
bnn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FOA43_003188 (RCL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bnn03009]
    FOA43_003188 (RCL1)
Ribosome biogenesis [BR:bnn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    FOA43_003188 (RCL1)
SSDB
Motif
Pfam: RTC RTC_insert Ribonuc_red_lgN
Other DBs
NCBI-GeneID: 62196589
NCBI-ProteinID: XP_038779391
UniProt: A0A875S3B1
LinkDB
Position
3:1084512..1085597
AA seq 361 aa
MAVTTFQGYENFRLRLVLSTLSGKPIKIEKVRADDLNPGLKDYEISFLRLLESVTNGSVI
EISYTGTTVIYRPGLIIGGSFTHNCPTSKACGYFLEPMLYLAPFSKKKFSIVFNGLTSSK
ADPGLDFIRWGLLPVMEKFGVREVELHTLKRGCPPNGGGEVHLLVNSLIPQPITIHILDI
QKISAIRGIAYCARVSPSVANRLVDASRNVLRPAGCEVNITTDVWRGENAGKSPGFGLTL
FSESKKTQLRYAVDDMGGPGETPEDLGERVAYNLLELVQKSGCLGRNQLALAFTFMVIGK
EDIGRIIVNKQQIDAKLIGLLRDIKELFGTEFFFKDCEDYDNCLYATAKGVGFTNASKKI
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggctgtcacaacattccaggggtatgaaaatttccgtctgagactagttctttccacg
cttagcggaaagcccatcaagatcgaaaaagtcagggctgatgaccttaatcctggtctt
aaggattatgagatctcgtttttaagattgttagaaagtgttaccaatggctccgttatt
gagatttcttacacaggtaccacagtaatttatagaccaggattaatcataggaggatct
ttcacacacaattgccccacatcaaaggcttgcggatatttcttggaacccatgctctat
ttggcacctttctcaaagaagaaattctctatagtgtttaacggattaacttcatcgaag
gcagatccaggtttggattttatccgttgggggttgcttcctgttatggaaaagttcggt
gttcgagaggttgaattgcatactttgaagcgcggctgcccacctaatggaggtggtgaa
gtgcatttacttgtcaatagtctaattcctcaacctattactatccatattcttgatatt
caaaaaatttctgctatcagaggaatagcgtactgtgctagagtgtctccttctgttgct
aaccgacttgtcgatgcttctagaaatgttctccgacctgctggttgcgaggttaacatc
actaccgacgtctggcgtggtgaaaatgccggtaaatcgcctggattcggtctaaccttg
ttttctgagtcgaaaaagactcaactaagatatgctgtcgatgatatgggaggaccagga
gaaactccggaggaccttggtgaaagagtggcttacaatcttctagaattggtgcagaag
agcggttgtcttggtagaaaccaactcgctttggcctttacctttatggtgatcggaaaa
gaggacattggacgaatcattgttaataagcagcagatcgatgccaagttgattggactt
cttagagacatcaaagagttgtttggtacagagttcttctttaaagactgcgaagattac
gacaattgtctctatgctactgccaaaggtgtaggcttcacgaatgcctctaaaaagatc
gcttaa

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