Brettanomyces nanus: FOA43_003260
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Entry
FOA43_003260 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
bnn
Brettanomyces nanus
Pathway
bnn03430
Mismatch repair
bnn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FOA43_003260
03460 Fanconi anemia pathway
FOA43_003260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_003260
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
FOA43_003260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
62196660
NCBI-ProteinID:
XP_038779439
UniProt:
A0A875SA39
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Position
4:complement(join(98623..101012,101289..101292))
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AA seq
797 aa
AA seq
DB search
MTMPIQRIDYGDVHKITSGQVIIDLTSAVKEVVENALDAESTQVNVIFKNYGLDSITVSD
NGTGIRPEDFENICLKHYTSKLTSFEDVETVGTFGFRGEAMSSLCAIAHVSIVTATKEEA
PKGCSLKYNQLGVLESKELVSRSCGTSVIIDSLFHNLPVRKIDLTKNIKREYHRAVDFLQ
CYALISTGVRLIVHHIDSRGRKSIILSTTGSINLKNNMLSVFGSNGMYGLEAVDLNIKVA
AKFHREQMALKVSGFVSNASFGQGRSASDRQYWYINKRPVLLPRFSKAINETYKKFNYLQ
YPTILLNIEVDAKFADVNVTPDKRTVLINNEAAVLEAFREGFHGLFSMNGVKIPKNNGVT
EKITERNKKQTTLESFSMGGRNEVVQSENREVSEDESVGSSNSNDSKHIAYPEPITTSKP
TDTPDSIADPEPIDDLEPIDSSRPMVDPEPIDDLEPIDSSRPMVDPKSSDDLEPIDSSRP
MVDPKSIDDPIESFEPIDALNECVQDTDNTSTLASSSFTSKPASRVTLSKKLGNVAFSTL
NVDQMVEFELPKSSTNAKRRKSLISNSCMNKKQKLDDISDNNAEELLTLTVSKKDFMSMQ
VVGQFNLGFILVTKKNVETGKMDMFIVDQHASDEKYNFERLQKETTFKNQPLVIPQKLEL
NAVDEMVVINSKKIFEKNGFKLRINMENNPGTRVQLLALPYSKNTIFDLSDFYELINLVR
KSDGNPDVRPSKVRSMFAMRACRSSIMIGRPLSKKIMTTVVQHLSGLDKPWNCPHGRPTM
RHLVELQGWGAFTEDCQ
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgcctattcaacgtattgactacggagatgtgcacaaaattacatctggtcag
gtaattattgacttgacatcagctgtaaaagaagttgtagagaatgcactcgatgccgag
tctactcaggtcaatgtcatcttcaagaattatggattagactcaatcacagttagtgac
aatggcacaggtataagacctgaagactttgaaaacatctgcctcaagcattatacttca
aagcttacgtcttttgaggacgtggaaacagtggggacgtttggtttcagaggtgaagcc
atgagttctctctgtgctatagctcatgtgtctatagtgacagctacgaaggaggaggca
cccaagggttgtagtttaaagtataatcaacttggcgtgttggaatcaaaggagctggta
tccagaagttgtggaactagcgtgatcattgacagtttgttccataatcttcccgtgaga
aagatcgaccttaccaagaatattaagagggaataccaccgggcagtggatttcttgcaa
tgttatgccttaatcagcaccggagtccgacttatagtgcatcatattgactcacggggc
cgcaaatcgatcatactctctactactggatccatcaatttgaagaataacatgctttct
gtgtttgggtccaacggtatgtatggattggaagctgtcgatttgaatataaaagtggct
gcaaagtttcatagggaacagatggcactcaaagtctctgggtttgtatccaatgcttcg
tttggtcaggggaggtctgccagtgatcggcagtactggtatattaataagaggccggtc
ctgttaccacgattcagtaaggccatcaatgagacatataagaaattcaactacttgcag
tatccgacgattctgttaaatattgaggtggatgcgaagtttgcggatgtaaatgtgacc
ccagataagagaactgttctaattaataatgaggcagctgtacttgaagcatttagagag
ggttttcatggattgtttagtatgaatggtgttaaaatacctaaaaataatggtgtcact
gaaaagattaccgaaagaaacaagaagcagactacattagagagcttttctatgggggga
aggaatgaggtggttcaatcagagaatcgggaggtttctgaagatgaatctgtgggatcc
tctaattctaatgattctaaacatattgcgtatcctgaacccattacgacttctaaacca
actgataccccggactctattgccgatcctgaacccattgatgatctggaacccattgac
agttctagacccatggtcgatcctgaacccattgatgatctggaacccattgacagttct
agacccatggttgatcctaaatccagtgatgatctggaacccattgacagttctagaccc
atggtcgatcctaaatctattgatgatcccattgaaagtttcgaacccattgatgctctt
aatgagtgtgtccaagatactgataatacatctacgctcgcatcttcatctttcacaagt
aagccagcatcccgagtcacgctatccaagaaattgggaaatgtagcattttctactctc
aatgtggatcaaatggtggaatttgaacttccaaagtcatctaccaatgctaagagaagg
aagtcgttgatttctaatagctgtatgaataagaaacagaaattggacgatatttcggac
aacaatgcggaggaattgttgactttgaccgtatcaaaaaaagattttatgtccatgcaa
gttgttggtcagtttaatcttggattcattttagtgaccaagaaaaatgtcgaaacagga
aagatggatatgtttattgtagaccagcatgcttcagacgaaaaatacaactttgaacgt
ctacaaaaagaaaccacctttaagaatcagcctttagtgattccacaaaagcttgaattg
aacgcagtggatgaaatggtggtgattaatagtaagaaaatcttcgaaaaaaatggtttc
aagctacgtatcaatatggaaaataatcctggtactcgggttcaactactggccttgcca
tactcgaaaaatactatctttgatctctccgatttctatgagttgatcaatcttgtaagg
aaaagtgatggcaatcctgatgttcgcccctccaaagtcaggtcgatgtttgccatgaga
gcttgtagatccagtatcatgataggtaggccgctgagcaagaaaattatgaccacagtg
gttcagcatctttcgggtttagataaaccttggaactgcccgcatggtaggccaactatg
agacaccttgtggagttacaaggctggggtgcgttcacagaagattgccagtga
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