Brettanomyces nanus: FOA43_003293
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Entry
FOA43_003293 CDS
T07002
Symbol
CHC1
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
bnn
Brettanomyces nanus
Pathway
bnn04142
Lysosome
bnn04144
Endocytosis
bnn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FOA43_003293 (CHC1)
04142 Lysosome
FOA43_003293 (CHC1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
FOA43_003293 (CHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bnn04131
]
FOA43_003293 (CHC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bnn04147
]
FOA43_003293 (CHC1)
Membrane trafficking [BR:
bnn04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
FOA43_003293 (CHC1)
Exosome [BR:
bnn04147
]
Exosomal proteins
Proteins found in most exosomes
FOA43_003293 (CHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
62196693
NCBI-ProteinID:
XP_038779472
UniProt:
A0A875RVY7
LinkDB
All DBs
Position
4:165897..170900
Genome browser
AA seq
1667 aa
AA seq
DB search
MSDNPPIDLIDVCQLQSLGINPASFNFMCTTLQSDHYVCCRETSDTKNTVAIVDLKNNNQ
LTRKSMSADSVIMNPSDFIIALRANGTTLQVFNLGTKQRLKSNVMHEPVIFWQWLNDKEI
GLVSANHIYLWNVLDGTENGPVQLTARHVSLASCQLTQMVSNYDSSWFALCGIAQENNRV
VGHIQLYSKERNISQPIEGHVCCFGKFRQQSAAADTQVFACASRTATGGTLHLLEIEHQP
NAPAYQKKSVEIFFPSEIANDFPVSIQVSDKYGVVYILTKFGFIHLYDLESGKKIFLNRI
SSDPIFTAAKFNDGRGLITVNRAGAVLAVEIATDRIVPYILSNLADVDLALSLASRAGLP
GAETLFTQQFNQSLATGDYQAAVKIAASSAQLRTPDTINRLKALSAQPGQPAPILQYLVF
LLDRGSLNKFESLELVRPLVQQNRADTLEKYLKEDKLTCSEEMGDLVKSSSIPLALAVYY
KANSSSKVVNCLAELGQTDKILPFCEKVDFHPNYTALIQSILRVNPDKAAEFSTQLLVSQ
PDLKIEQIADIFFSQNYIQQGTAFLLDALKDDKPAQGELQTRLLQVNLLNAPQVADAILG
NNMFSHYDRPTIAALCEKANLNQRALELYDDTKDIKRVITQHGAEIPADWLVAYFGKLSV
EQTIACLRSMLASKNKTQNLQTVIQVATKYSDLVSAPTLIKIFEEYDCTEGLYYYLASIV
NTTQDSDVVLKYIQSAAKMGQTKEIERVVRDNNVYNGEKVKNFLKDANLEDQLPLIIVCD
RYDYVHDLILYLYKNKYFKFIEVYAQQVNPSKTPQVVAALLDVDCDENIVKTLLLSVVGR
VPIGELCDEVEKRNRLKILLPFLEASLQQGVTDGAVYDTLAKIYIDSNNNPEKFLKENDQ
YNTLVVGKYCEKRDPSLAYIAYEKGQNDAELVQITNENAMYKYQARYVLNRCDAQLWAIV
LSDDNQHRRQLIDQIVGTAIPELEDPQPVSIAVKAFMDNGLTNELVELLEKIIIEPSPFN
DNPSLQALLILTAIKVDPSRVMGYVEKIDAYDPEEVAPLCIENNLYEEAFAIYDKFEKYP
EAMHVLTDDIMSLDRASDYSEKLDKPQIWSQLGAAQLNGLRVSEAIESYLKAQDPSNFEQ
VIDIAEHAGKEESLVPYLKMARETLQEPVVDGALINAYATLDNLDGMGKFLQLSNVADLE
TIGDKLYDAANYQAAKLIYSNISNYAKLASTLVYLNDYQGAVDCARKASNVGVWKQVNQA
CLDNKEFRLAQICGLNLIVHAEELDELVTQYEYNGYFSQLISLFENGLALERAHMGMFTE
LAILYTKYQPEKTMEHLKLFWSRINMPKVIEACDEAHLWPELVFLYKHYDEWDNAALTMM
DHSECAFDHASFKEIIVKVSNLEIYFKAINFYTNFHPSLLNDLLAALVLRLDLPRVVRIF
QKSDNLPLIKPFIISILDKNNSIVNQAYHDLLIEEEDYKSLQSVIEAHDKFDQIGLAERL
EKHDLIFFRKIAAIIYRKNKKWNKAITLLKTDKLWSEAIETAAMSEQSKVATELLEYFVE
TGNRECTIATLYSCYSLVNYDKVMELSWLYTLGDLIKPYEISVAKETQTKIAELYSDLKD
RESKKEDDEDEESNAPHRLLITNGTGIPTGASLNYNPTGAGFGNGGF
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataaccctcctattgacctcattgacgtgtgccaactgcagtccttgggcatc
aacccggccagttttaactttatgtgcactacccttcaatctgaccactatgtgtgctgc
cgtgaaacttctgacacgaagaacacagttgccattgttgacttgaagaacaacaaccaa
ctaactcgcaagagtatgagcgcagattcggttattatgaatccttccgatttcattata
gcccttcgtgcgaatggcactacgttgcaggttttcaaccttggcactaaacagagactc
aaatccaatgtgatgcacgagcctgtcatcttttggcagtggcttaacgacaaagagatt
ggccttgtgagcgcaaaccacatctatctttggaatgtgctggatggtaccgaaaatggt
cctgttcagttgactgctcgtcatgtttccttggccagttgccaactgacccagatggtt
agcaactatgactcctcatggtttgccctttgtggcattgctcaggagaacaaccgtgtt
gttggccatattcagttgtattccaaggaaagaaacatctcacaaccaattgaaggtcac
gtgtgctgctttggtaaattccgtcagcagagtgccgccgctgatactcaggtatttgca
tgcgcttcccgtactgccaccggtggcactttgcacttgcttgagattgaacatcagccc
aatgctcctgcttatcagaaaaagagtgttgaaatcttctttccatcggaaattgccaac
gatttccctgtgtcaattcaggtttctgacaaatacggtgttgtctacattctcacaaag
tttggcttcatacatttatacgatctagagagtggcaagaagatattcctcaacagaatt
tcttcagatccaatatttactgctgccaaattcaatgacggtcgcggactaattaccgtc
aaccgtgcaggtgccgttctggctgtggaaattgcaaccgatcgtattgttccatacatt
ctttccaacttggctgatgttgacttggctctaagcttggcttccagagctggcttgccc
ggtgcagagaccttgtttactcagcaattcaaccagtcgttggccaccggtgactatcaa
gcagctgtcaaaattgcagcatcttctgctcaactaagaactcctgatactatcaacaga
ttaaaggcattatccgcccaaccgggtcaaccggctccaatcttgcagtatttggtgttc
ttacttgatcgtggctcgcttaacaagtttgaatctttagagttagttagacccttagtc
caacagaaccgtgctgatactttggaaaaatacttgaaagaagataagttgacttgctca
gaggaaatgggtgaccttgtcaagtcttccagtattcctcttgcattggctgtgtactac
aaggccaattcttcctcgaaagtggttaattgtcttgccgaattaggacagaccgacaag
attttacctttctgtgagaaggttgactttcatccgaactacactgctcttattcagagc
attttgcgtgttaaccctgataaggctgccgagttttctactcagctattggtttctcaa
cctgatttgaagatcgagcagattgctgacattttcttttctcagaattacattcagcaa
ggtactgcctttttacttgacgcccttaaagatgataagcctgctcagggcgagttgcaa
acacgtcttcttcaagtcaatttgctcaacgcccctcaagtagctgatgctattttgggc
aacaatatgttctctcactacgatagaccaacaatagctgctttgtgtgagaaagctaac
ttaaatcaacgtgctctcgaattatacgatgatactaaggatatcaagcgtgttattacg
cagcatggcgcagaaattccggctgactggcttgttgcatacttcggtaagcttagtgtt
gaacagacgattgcctgtttgcgctctatgctcgccagtaagaacaagactcagaaccta
caaactgtcattcaggttgccacaaagtattctgacttggtaagtgctccaactttgatc
aagatttttgaagagtacgattgtactgaaggattgtactactacttggcatcgattgtt
aacacaacacaggattccgatgttgttcttaagtacattcaatctgccgccaagatggga
cagacaaaagagattgagcgtgtggttagagacaataacgtttacaatggtgaaaaagta
aagaactttttgaaggatgccaatttggaagatcaattgccgttgataattgtttgtgat
cgttatgattatgtccatgacttgattctctatctttacaagaacaagtacttcaaattt
attgaggtttacgctcagcaggtcaatccatcaaaaactccccaggtagttgccgcctta
cttgacgttgactgtgatgaaaacatcgtcaagacattacttttgtctgtagttggccgt
gttccaattggtgagctctgcgacgaagtggaaaagcgtaacagactaaagattctctta
ccatttttagaagcttccttgcagcagggtgttactgacggggctgtctatgatacccta
gcaaagatctacatcgactccaacaataatcctgagaagtttttgaaagagaatgatcag
tataacacattagtcgtcggtaagtactgtgagaagagagatccatctttggcatacatt
gcttatgaaaagggccaaaacgatgctgaattggttcagatcaccaacgaaaatgctatg
tacaagtatcaagctcgctatgtgctcaatagatgtgacgcccaattatgggccatcgtg
ttatctgatgataatcagcacagacgtcaacttatcgatcaaatcgttggtactgctatc
ccagaattggaagatcctcaaccagtgtctatagccgttaaggcattcatggacaatggt
ttgactaacgagttggttgaattactcgagaagatcatcatcgaaccttctccattcaac
gacaatccatcccttcaagctcttctgattttgactgcgattaaagttgatccatccagg
gtcatgggatacgttgagaagatcgatgcctatgatccagaagaagtggcacctctttgt
attgagaataatctttatgaagaagcatttgccatttatgataagtttgaaaagtatcct
gaagcaatgcacgttctcacggatgatattatgtcgttggaccgcgctagcgattattct
gagaagctcgataaacctcaaatttggtctcagcttggagccgctcagcttaatggttta
cgtgtttcggaggctatcgaatcttacctgaaagctcaggatccatccaactttgagcaa
gttattgatattgcagaacatgccggtaaggaggaatcacttgttccatatttgaagatg
gctcgtgagactttgcaggaacctgtcgtggatggtgcacttattaatgcttatgctacc
ttggacaaccttgatggcatggggaagttcttgcagttatctaatgttgcagatttggaa
acaattggtgacaagctatatgacgccgcaaactaccaggccgccaaattgatctactct
aatatttccaactacgctaagttggcttccactttggtctatctcaacgattatcaaggt
gcagttgactgtgcacgtaaagcttctaatgtcggtgtgtggaagcaagttaatcaggca
tgtcttgacaataaagaatttcgccttgcacaaatatgtggcctcaatttgattgttcat
gctgaggaattggacgagttggtaactcaatatgaatacaacggatatttcagccagtta
atctcattgtttgaaaatggtttggctctagaaagagcacacatgggtatgttcaccgag
ttggctattctttacacaaagtaccaaccggagaagaccatggaacacttaaaattgttc
tggtctcgtatcaatatgcctaaggtgatcgaagcttgtgatgaggcccatctctggcca
gagttggttttcctttacaagcattatgacgagtgggataatgctgcgcttacgatgatg
gatcattcagaatgtgcatttgatcatgcttccttcaaggaaattattgtcaaagtttcg
aacttggaaatttacttcaaggctataaacttctacacaaatttccatccttctttattg
aatgacttgcttgccgcacttgttttgcgcttggacttgcctcgtgttgtgagaatcttc
caaaaatcagataacttgccattgatcaagccatttattatttcgatacttgacaagaat
aactctattgttaatcaggcttaccatgacctattgattgaggaagaggattacaaatcc
cttcagtctgtcattgaagctcacgataaattcgatcaaatcggcctagctgaaagattg
gaaaaacatgaccttatatttttcagaaagattgctgccataatttaccgtaaaaacaag
aaatggaacaaggcaatcactctattgaaaacagacaaactgtggtccgaggcaatcgag
actgctgccatgtccgaacaatcaaaggtcgctacagagttgttagaatactttgtggaa
actggcaaccgtgaatgtacgattgccacgttgtactcttgctactcgttggtaaactat
gacaaggttatggaactctcgtggctttacactcttggagacttgatcaagccatacgag
atttcagttgccaaggagactcagaccaagatcgccgaactttatagcgacttgaaagat
agagagtctaagaaagaagatgacgaggatgaagagtctaacgctcctcataggttgctt
attaccaatggtacaggaattcctaccggtgcatctcttaactacaatccaacgggtgca
ggatttggtaatggcggtttctag
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