Brettanomyces nanus: FOA43_003298
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Entry
FOA43_003298 CDS
T07002
Symbol
SHM1
Name
(RefSeq) glycine hydroxymethyltransferase shm1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bnn
Brettanomyces nanus
Pathway
bnn00260
Glycine, serine and threonine metabolism
bnn00460
Cyanoamino acid metabolism
bnn00630
Glyoxylate and dicarboxylate metabolism
bnn00670
One carbon pool by folate
bnn00680
Methane metabolism
bnn01100
Metabolic pathways
bnn01110
Biosynthesis of secondary metabolites
bnn01200
Carbon metabolism
bnn01230
Biosynthesis of amino acids
bnn01240
Biosynthesis of cofactors
bnn04981
Folate transport and metabolism
Module
bnn_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FOA43_003298 (SHM1)
09102 Energy metabolism
00680 Methane metabolism
FOA43_003298 (SHM1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FOA43_003298 (SHM1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FOA43_003298 (SHM1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FOA43_003298 (SHM1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FOA43_003298 (SHM1)
Enzymes [BR:
bnn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FOA43_003298 (SHM1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
SidM_N
DegT_DnrJ_EryC1
DUF6906
Motif
Other DBs
NCBI-GeneID:
62196698
NCBI-ProteinID:
XP_038779477
UniProt:
A0A875S7J9
LinkDB
All DBs
Position
4:complement(184224..185696)
Genome browser
AA seq
490 aa
AA seq
DB search
MFTRSFLRPATRAWTVQAKRYYAISAKQLDLLSNHVDKVDPEMNELLKEERQRQKKSITL
IPSENFTSEAVMDLLGSELQNKYSEGYPGERYYGGNEIIDKVESLCQKRALEAYGLNPDK
WGVNVQALSGAPANLYAYSAVMNVGDRLMGLDLPHGGHLSHGYQTKSHKISFVSKYFQTM
PYRVDETTGLIDYDMLEKTATLFRPKIIVAGASAYPRIIDYKRMKQIADKVGAYLMSDMA
HISGMVAAGVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRRVTKKGKEIPYDLEDK
INFSVFPAHQGGPHNNVIGALAVALKQAMTPEFKEYQENIVKNASAFSDSLNKKGFDMVT
GGTNTHLILIDLRSKNIDGARVEAVLERMNIAANKNTIPTDSSAMFPNGLRVGTPAMTTR
GFMAPEFDKVAEFIDRAVQIAVDLKSKEQGGKAKEKLANFKKLADCDPRIKALDAEVVTF
ASEYPNPGDH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacgttcttttctcagacccgctacaagagcatggacggttcaggctaaacgt
tattatgcaatatcggccaagcaattggacttactttccaatcacgtcgataaagtcgat
cctgagatgaatgaacttctgaaggaagaaagacagagacagaagaaatcgatcactttg
attccctctgagaatttcacctctgaagctgttatggacttacttggatctgagttgcaa
aacaagtactctgaaggttatcccggagagagatactacggtggtaacgagatcattgat
aaagtcgagtcattgtgtcagaagagagctttggaggcctacggcttaaatcctgataag
tggggcgttaatgttcaggccttgtctggtgctcctgccaatctatatgcatattctgct
gtgatgaatgttggagacagattaatgggtcttgaccttcctcatggtgggcatttgtct
cacggttatcaaactaaatcccataagatttcctttgtatctaaatatttccagacgatg
ccttatagagtcgatgagactactggcttgattgattatgacatgttggagaaaacagcc
acccttttcagaccaaagatcattgttgctggtgcctctgcatatccaaggattatcgat
tataagaggatgaagcagatagctgacaaggttggtgcttatttaatgtccgatatggct
catatatctggtatggttgctgccggtgttacagattctccattcccatactctgatatt
gtcacaactaccacccacaaatccctaagaggccctagaggtgctatgatcttcttcaga
aagggtataagaagagtcaccaaaaagggaaaggaaattccttacgatttggaggataag
atcaacttttctgtttttcctgcccaccaaggaggtccccataacaacgtcattggtgcc
ttagctgttgcattgaagcaggctatgactccagagttcaaggaatatcaagagaatatt
gttaaaaatgcctctgccttttccgactcccttaacaagaaaggctttgatatggttact
ggtggtaccaacactcatttgattttgattgatttaagatctaagaacattgatggggct
agggttgaagccgttctagagagaatgaacatcgctgccaacaaaaacaccattccaact
gatagctcagccatgttccctaacggattgagagttggaactcctgctatgacaaccaga
ggcttcatggctcctgagtttgataaagtcgccgagttcattgaccgtgccgtgcaaata
gctgttgatttgaagagtaaagagcaaggtggaaaagccaaggaaaaattggccaacttc
aagaaattggcagattgtgatcctagaatcaaggccttggacgctgaagtcgttaccttt
gcctctgagtaccctaatccaggagatcattga
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