KEGG   Brettanomyces nanus: FOA43_003395
Entry
FOA43_003395      CDS       T07002                                 
Symbol
TFB5
Name
(RefSeq) TFIIH complex subunit tfb5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
bnn  Brettanomyces nanus
Pathway
bnn03022  Basal transcription factors
bnn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FOA43_003395 (TFB5)
  09124 Replication and repair
   03420 Nucleotide excision repair
    FOA43_003395 (TFB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bnn03021]
    FOA43_003395 (TFB5)
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_003395 (TFB5)
Transcription machinery [BR:bnn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FOA43_003395 (TFB5)
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FOA43_003395 (TFB5)
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 62196795
NCBI-ProteinID: XP_038779574
UniProt: A0A875S8K4
LinkDB
Position
4:complement(386797..387012)
AA seq 71 aa
MARAIKGSLVECDPSIKALIVKIDSDYRDIVIEELDDTHLLVDPSKIPFIKRELSKLLSE
NMYNLNEDNQA
NT seq 216 nt   +upstreamnt  +downstreamnt
atggcaagagctattaaaggtagtttagttgaatgcgatccttctatcaaagcattgatc
gtgaagattgattcggattatagagacatagtcattgaagaattggacgatacccactta
ctagtggatccatccaagattccattcattaagcgagaactcagtaagctattgtcggaa
aatatgtacaacctcaacgaagacaatcaagcttaa

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