Brettanomyces nanus: FOA43_003450
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Entry
FOA43_003450 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
bnn
Brettanomyces nanus
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bnn03009
]
FOA43_003450
Ribosome biogenesis [BR:
bnn03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
FOA43_003450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_NWD2_C
WD40_like
Beta-prop_SCAP
Beta-prop_VPS8
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
62196850
NCBI-ProteinID:
XP_038779629
UniProt:
A0A875SAT0
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Position
4:484753..486174
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AA seq
473 aa
AA seq
DB search
MDEIAFYCCSGDATDKHDANSFAYLSSLHSSKQYLQYRQCYSGRNGSVLTGIGQETKLIS
ACNDRAIIQVYLYGKESPEQKIPIPEPLSCLEICDDWLLVGGGQSGRIYVWELDSGLLLA
VKECHYQAVNVIRYNKGFLVSGGADSRVVIWRILDLANDSINPAKPYSILTDNTLPVTDL
VITNGLVSDLKVYTASRDCTVRCYSIASKRLITTFVLPTKVESLAADPAYRALYAGQDDG
FIRMIPLYRGNVKTHVLEAVGGMGSIVTLKPDLDLQETFVCHKDDGNGQTIVTKLQVTLD
GTYLVSGDSKGNVFVVDIATKQIQRKFKPLAGAVSQILLAYTKADNKQLDRHYNDKNMVR
VIPTLKRVVVDANAIEKHEIQKKLGELQPPYFGEQKFDMNRFLEDVKTQQMWFTNLSDID
STVIRQGSENLFANGKAAGELTVLKTQLEQKNAAYTTLKEKYEQLYKEHINGL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattgcattttactgttgcagtggtgatgctactgataagcatgatgcgaat
tcgtttgcatatctttcttccttgcattcttctaaacaatacttgcagtatagacagtgc
tacagtggaagaaatggctcggttttgactggtataggtcaagaaacgaagcttatttcg
gcgtgcaatgatcgtgccataatacaagtttatctttatggaaaagagagccctgaacag
aaaatccctattccagagccgttgagctgtttggaaatatgcgacgattggttactagta
ggaggagggcagtccggtagaatttatgtttgggaacttgattctggacttctattggct
gttaaggaatgccattatcaggctgtaaatgttatcaggtataataagggatttttggta
agtggaggtgctgattctagagtggtcatttggagaatcctcgatttggctaatgacagc
atcaatccagccaagccgtattcaatcttgacagataacactcttcctgtcacagatttg
gtgatcactaatggccttgtctctgacttgaaagtgtatacagcttccagagattgcact
gtgagatgctatagtatagcgtccaagagattgattactactttcgttctacctaccaag
gtagagtctttggctgctgatccagcatatagagccctatatgctggccaggatgatggc
ttcataagaatgattcctttatatcgaggcaatgtcaaaacacatgtgcttgaagctgtg
ggaggaatgggcagtatagtaacgttgaagccagacttagatttacaagagactttcgtt
tgccataaagatgatggaaatggtcaaactattgttacgaaattgcaggtgacgcttgat
ggtacgtatttggtgtctggagactctaaaggtaacgtatttgtggttgatatagcgaca
aaacagattcagcgcaagttcaaacctcttgcaggagccgtgtctcagattctacttgcc
tacaccaaggccgataacaagcagcttgacagacattacaatgataagaatatggtaagg
gtgattcctacgttgaagagagttgttgttgatgccaatgccattgagaagcatgagatt
cagaaaaagttgggcgaactccagcctccctactttggagaacagaagtttgatatgaac
agattccttgaggatgttaaaacgcagcagatgtggtttactaatctcagtgatatcgat
tctacagtgattagacaaggtagcgaaaatcttttcgcaaatgggaaagcagcaggagag
ttgacggtgttgaagactcaattggaacagaagaatgctgcctacaccacgctaaaagag
aaatatgaacagttatataaagagcacatcaatgggctgtaa
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