Brettanomyces nanus: FOA43_003490
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Entry
FOA43_003490 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10839
UV excision repair protein RAD23
Organism
bnn
Brettanomyces nanus
Pathway
bnn03420
Nucleotide excision repair
bnn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOA43_003490
09124 Replication and repair
03420 Nucleotide excision repair
FOA43_003490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bnn03051
]
FOA43_003490
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_003490
Proteasome [BR:
bnn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
FOA43_003490
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
FOA43_003490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Dsc3_N
Rad60-SLD_2
EAD1
MCM_N
Ubiquitin_5
CUE
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
62196890
NCBI-ProteinID:
XP_038779669
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Position
4:complement(561211..562512)
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AA seq
433 aa
AA seq
DB search
MKVIFKDFKKEKIPIDIDSEDTIFSGKEKLASVKQCEPEQLKFVYSGKILKDDKTFDSFK
VKEDDQIIFMISKAKKVKKEDSREGNEAEQTSKSKEGMATSATEGTPIAAAAAAETPAAT
EVSVTSDAPIATGSTDTAEVNTSTEEFDASTFAVGRAREAALQNIVAMGFEREQVERALT
AAFNNPDRAVEYLLNGLPEIHSQSNPTAVPAAESTVTEIGNSEGVQKATDDSKSSEAAAL
SVAPSASGVASNTTAAPAATAAITTAATTAATTAAISLPTSTPNPNNLFEQAAAQQSGET
QQSGDYISSLRELLQQQPEMAEAVLQQLAASNPQLAQVIRTNPEAFMRYLTDGDQSALGE
ALGIPREYLEGAEGAEDESGDNATRIEITPEENEAISRLCELGFDRNLVVQVYFACDKNE
EMAANLLFSEHAD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgatctttaaagattttaaaaaagagaagattcctatcgatatcgattccgaa
gacaccattttctctggcaaggagaaacttgcgtctgtgaagcaatgcgaaccggagcag
ttgaagtttgtgtattcaggaaagattcttaaggatgataagacctttgatagttttaag
gtgaaggaagatgatcagataatttttatgatttccaaagccaagaaagttaagaaggaa
gattctagagagggcaatgaggcagagcagaccagcaagtcgaaggaggggatggctact
tctgctactgaaggtactcctatagctgccgctgccgctgctgagacgcctgctgccaca
gaagtatctgtaacttcagacgcgcctattgctactggctctacagacactgctgaagtt
aatacgagcactgaagaatttgatgcctcaacttttgccgttggacgagcacgcgaagcg
gcattgcaaaacattgttgccatgggttttgaaagagagcaagttgagagagcactgact
gctgcatttaataatcctgatagagcggtggagtaccttttgaatggactaccggagatt
cattctcagagcaaccctaccgctgtgccagctgctgagtcaactgttaccgaaattggt
aactcagaaggagttcaaaaggcaactgacgactccaagtcctctgaagctgctgcatta
tcggtggccccatcggcatcgggtgtggcttctaatacgactgctgctcctgctgctact
gctgctattactactgccgccactactgctgctactacggctgctatttcgttacccact
tctacccctaatcccaacaacttgtttgagcaggcagcagctcaacaatctggcgaaacc
cagcaaagtggggactatatctcgtcactaagagagcttttacagcagcagccagagatg
gcagaggctgtactccagcagttagcagcatctaatccacagctagcccaggtgatccgt
acaaacccagaggcatttatgaggtatcttacagatggtgatcaatcagcattaggagaa
gctttgggaatacctagagagtacttggaaggtgctgagggagcagaagatgaatcagga
gataatgctactcgtattgaaattacaccagaggagaatgaggccataagtagactctgt
gagcttggcttcgacagaaacttagttgtacaggtgtattttgcgtgtgataaaaacgag
gagatggctgcaaacttgttgttcagcgagcacgcagattag
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