KEGG   Brettanomyces nanus: FOA43_003510
Entry
FOA43_003510      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
bnn  Brettanomyces nanus
Pathway
bnn03082  ATP-dependent chromatin remodeling
bnn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    FOA43_003510
   03083 Polycomb repressive complex
    FOA43_003510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bnn03036]
    FOA43_003510
Chromosome and associated proteins [BR:bnn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     FOA43_003510
  Histone modification proteins
   HAT complexes
    HATB complex
     FOA43_003510
   HDAC complexes
    Sin3A-HDAC complex
     FOA43_003510
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     FOA43_003510
    PRC2.2
     FOA43_003510
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     FOA43_003510
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    FOA43_003510
  Chromatin remodeling factors
   NuRD complex
    FOA43_003510
   NuRF complex
    FOA43_003510
   NuRF complex (fruit fly)
    FOA43_003510
SSDB
Motif
Pfam: Beta-prop_EIPR1 WD40_CDC20-Fz WD40 CAF1C_H4-bd Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C EIF3I Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 62196910
NCBI-ProteinID: XP_038779689
UniProt: A0A875SB11
LinkDB
Position
4:complement(609394..610818)
AA seq 474 aa
MPINLDLTQNDNVPSKSDIILQPFASSPLEVLEDTDTDDSSPAIDDEIQLKYKIWKKNTP
LLYDYIQTSTLLWPSMSVEWFPDVESHGNVNIQRLLLGSYSNGYNSFENLQLCTIKVPKS
VEGLTLKDCEFDSDKHEFTTSNYPIANNDGNCKGALHMVQQIPHQGDINKARLMPQNPDL
LATISNNGSVNVFDRTKKPNGCDSRELSKSRKVFDDEEEESTCLSDIKLQFHTGDGWGLD
WNKFKEGELVTGASDGSIALWDIRDGFKKPQRSSNAVTATSHRKFKTCILSPISTLFCHD
YGVNTVQYVWFHDSLIGTAGEDHKFKMFDTRSLDGNPVIQITLQHPINTLDFNKQDQYGL
VLGDDKGNLLIEDIRYPERPQIVISNAHSDSITAVAWNHEYGNILGSSSTDGLVKLWKFG
SGESSTIEHKLIFTHGGHMLGVSDIAWNPNDPKMLASCSDDNSVHVWKPSQAVF
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgcctataaaccttgatctaacacagaatgataatgtaccttcaaagtccgatattatt
ttacagccctttgcaagctctccccttgaagttttagaggacaccgatacagatgattct
tctccggccatcgatgatgagatccaacttaagtacaagatatggaaaaaaaatactcct
ctactctatgattacatacaaacaagcacgttactttggccttctatgtctgtggaatgg
tttcctgatgtggaatcacatggtaatgtaaatattcaaaggttgttgcttggatcatat
tcaaatggctataacagctttgagaatttacagctctgcaccatcaaagttcccaaaagt
gtcgaaggactcacattgaaagattgtgaattcgactctgataagcacgagtttacaaca
tccaattaccctatagcaaataatgacggaaactgcaaaggagcgcttcatatggtgcag
cagattccccaccaaggtgatattaataaagccagactgatgccacagaatccagattta
ctggctacaatttcaaacaatggttctgtgaatgtttttgataggaccaagaaaccaaat
ggctgcgattcccgagaactgtccaagagcagaaaggtatttgatgacgaagaggaggag
agcacttgtctttctgacattaaacttcaatttcacacaggcgacggatgggggcttgat
tggaacaaatttaaagagggtgaactagtaactggtgccagcgatggctctatagcacta
tgggatattagggacggattcaaaaagccacaaagatcttcaaatgcagttactgctact
agccacagaaaattcaagacgtgcattttgtccccgatatctacactattttgccatgac
tacggtgttaatactgttcagtacgtctggttccatgactctttaattgggaccgcaggc
gaagatcataaattcaaaatgttcgatacaagatcactcgatgggaatcccgtaattcag
attactcttcaacatcctataaataccctggacttcaataaacaggatcagtatggactg
gttctaggcgacgataagggtaacttgttaatagaggatattagatatcctgaaaggcct
cagatcgttatttccaacgctcatagcgattcaattacagctgtcgcatggaatcatgag
tatggcaatattttaggttcatcttctactgatggattagtcaaactctggaagtttggt
tctggcgaaagcagtactattgagcacaaacttatatttacccatggtggtcatatgctg
ggagtttctgatatagcatggaatcctaacgatcctaagatgcttgccagttgctctgat
gataactcagtgcatgtttggaagccttcgcaagccgtcttttaa

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