Brettanomyces nanus: FOA43_003510
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Entry
FOA43_003510 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10752
histone-binding protein RBBP4
Organism
bnn
Brettanomyces nanus
Pathway
bnn03082
ATP-dependent chromatin remodeling
bnn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FOA43_003510
03083 Polycomb repressive complex
FOA43_003510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_003510
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
FOA43_003510
Histone modification proteins
HAT complexes
HATB complex
FOA43_003510
HDAC complexes
Sin3A-HDAC complex
FOA43_003510
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
FOA43_003510
PRC2.2
FOA43_003510
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
FOA43_003510
Heterochromatin formation proteins
Other heterochromatin formation proteins
FOA43_003510
Chromatin remodeling factors
NuRD complex
FOA43_003510
NuRF complex
FOA43_003510
NuRF complex (fruit fly)
FOA43_003510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
62196910
NCBI-ProteinID:
XP_038779689
UniProt:
A0A875SB11
LinkDB
All DBs
Position
4:complement(609394..610818)
Genome browser
AA seq
474 aa
AA seq
DB search
MPINLDLTQNDNVPSKSDIILQPFASSPLEVLEDTDTDDSSPAIDDEIQLKYKIWKKNTP
LLYDYIQTSTLLWPSMSVEWFPDVESHGNVNIQRLLLGSYSNGYNSFENLQLCTIKVPKS
VEGLTLKDCEFDSDKHEFTTSNYPIANNDGNCKGALHMVQQIPHQGDINKARLMPQNPDL
LATISNNGSVNVFDRTKKPNGCDSRELSKSRKVFDDEEEESTCLSDIKLQFHTGDGWGLD
WNKFKEGELVTGASDGSIALWDIRDGFKKPQRSSNAVTATSHRKFKTCILSPISTLFCHD
YGVNTVQYVWFHDSLIGTAGEDHKFKMFDTRSLDGNPVIQITLQHPINTLDFNKQDQYGL
VLGDDKGNLLIEDIRYPERPQIVISNAHSDSITAVAWNHEYGNILGSSSTDGLVKLWKFG
SGESSTIEHKLIFTHGGHMLGVSDIAWNPNDPKMLASCSDDNSVHVWKPSQAVF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaaccttgatctaacacagaatgataatgtaccttcaaagtccgatattatt
ttacagccctttgcaagctctccccttgaagttttagaggacaccgatacagatgattct
tctccggccatcgatgatgagatccaacttaagtacaagatatggaaaaaaaatactcct
ctactctatgattacatacaaacaagcacgttactttggccttctatgtctgtggaatgg
tttcctgatgtggaatcacatggtaatgtaaatattcaaaggttgttgcttggatcatat
tcaaatggctataacagctttgagaatttacagctctgcaccatcaaagttcccaaaagt
gtcgaaggactcacattgaaagattgtgaattcgactctgataagcacgagtttacaaca
tccaattaccctatagcaaataatgacggaaactgcaaaggagcgcttcatatggtgcag
cagattccccaccaaggtgatattaataaagccagactgatgccacagaatccagattta
ctggctacaatttcaaacaatggttctgtgaatgtttttgataggaccaagaaaccaaat
ggctgcgattcccgagaactgtccaagagcagaaaggtatttgatgacgaagaggaggag
agcacttgtctttctgacattaaacttcaatttcacacaggcgacggatgggggcttgat
tggaacaaatttaaagagggtgaactagtaactggtgccagcgatggctctatagcacta
tgggatattagggacggattcaaaaagccacaaagatcttcaaatgcagttactgctact
agccacagaaaattcaagacgtgcattttgtccccgatatctacactattttgccatgac
tacggtgttaatactgttcagtacgtctggttccatgactctttaattgggaccgcaggc
gaagatcataaattcaaaatgttcgatacaagatcactcgatgggaatcccgtaattcag
attactcttcaacatcctataaataccctggacttcaataaacaggatcagtatggactg
gttctaggcgacgataagggtaacttgttaatagaggatattagatatcctgaaaggcct
cagatcgttatttccaacgctcatagcgattcaattacagctgtcgcatggaatcatgag
tatggcaatattttaggttcatcttctactgatggattagtcaaactctggaagtttggt
tctggcgaaagcagtactattgagcacaaacttatatttacccatggtggtcatatgctg
ggagtttctgatatagcatggaatcctaacgatcctaagatgcttgccagttgctctgat
gataactcagtgcatgtttggaagccttcgcaagccgtcttttaa
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