Brettanomyces nanus: FOA43_003684
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Entry
FOA43_003684 CDS
T07002
Symbol
RPB9
Name
(RefSeq) DNA-directed RNA polymerase II core subunit rpb9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
bnn
Brettanomyces nanus
Pathway
bnn03020
RNA polymerase
bnn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOA43_003684 (RPB9)
09124 Replication and repair
03420 Nucleotide excision repair
FOA43_003684 (RPB9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_003684 (RPB9)
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_003684 (RPB9)
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
FOA43_003684 (RPB9)
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
FOA43_003684 (RPB9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Zn_ribbon_recom
Cas12f1-like_TNB
Zn_ribbon_GRF
DZR
DUF7542
Motif
Other DBs
NCBI-GeneID:
62197084
NCBI-ProteinID:
XP_038779863
UniProt:
A0A875S5R5
LinkDB
All DBs
Position
4:complement(995068..995409)
Genome browser
AA seq
113 aa
AA seq
DB search
MSFRFCAECNNMLYPREDKEHKRLLYQCRNCSYSELADSPRVYRHELITHIGETAGVVED
IGSDPTLPRSQKTCPKCSNKECVFFQSQQRRRDTSMVLFYVCLECKHVFRSDE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcagattctgtgcagaatgcaacaatatgttgtatccaagggaggataaagag
cataagcgtcttctctaccagtgccggaattgctcttactctgagcttgctgacagccct
agggtgtatagacatgagctcatcactcatattggtgagactgcgggagttgtggaagat
atcggttccgatccaactcttcccagatctcagaagacttgtccaaaatgttccaataag
gagtgtgtattcttccaatcacagcaaagaagaagagataccagtatggttttgttctac
gtgtgtctagagtgtaagcacgtgtttagaagtgatgagtag
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