Brettanomyces nanus: FOA43_003896
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Entry
FOA43_003896 CDS
T07002
Symbol
TEF1_2
Name
(RefSeq) translation elongation factor EF-1 alpha
KO
K03231
elongation factor 1-alpha
Organism
bnn
Brettanomyces nanus
Pathway
bnn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOA43_003896 (TEF1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_003896 (TEF1_2)
03016 Transfer RNA biogenesis [BR:
bnn03016
]
FOA43_003896 (TEF1_2)
03012 Translation factors [BR:
bnn03012
]
FOA43_003896 (TEF1_2)
04131 Membrane trafficking [BR:
bnn04131
]
FOA43_003896 (TEF1_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bnn04147
]
FOA43_003896 (TEF1_2)
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
FOA43_003896 (TEF1_2)
Transfer RNA biogenesis [BR:
bnn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
FOA43_003896 (TEF1_2)
Translation factors [BR:
bnn03012
]
Eukaryotic type
Elongation factors
FOA43_003896 (TEF1_2)
Membrane trafficking [BR:
bnn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
FOA43_003896 (TEF1_2)
Exosome [BR:
bnn04147
]
Exosomal proteins
Proteins found in most exosomes
FOA43_003896 (TEF1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
62197296
NCBI-ProteinID:
XP_038780072
UniProt:
A0A875RWU0
LinkDB
All DBs
Position
4:1433329..1434678
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKLHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEASEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGV
GEFEAGISKDGQTREHALLAYTLGVRQLIVAVNKMDSVKWSEERFEEIKKEVSNFIKKVG
YNPKKVPFVPISGWNGDNMIEPSTNCPWYKGWTKEAKSGVVKGKTLLEAIDSIEPPSRPV
NKPLRLPLQDVYKIGGIGTVPVGRVETGTIKAGMTVTFAPVGVTSEVKSVEMHHETLVNG
GTPGDNVGFNVKNVSVKEIKRGYVAGDVKNDPPKGCTSFTAQVIILNHPGQIQAGYSPVL
DCHTAHISCRFDELLEKIDRRTGKKTEDHPKSIKRGDAAMVKMVPTKPMCVEAFTDYPPL
GRFAVRDMRQTVAVGVIKSVVKTDKVAIK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagctacacattaacgttgtcgtgatcggtcacgtcgactctggaaaa
tcaactactaccggtcacttgatttacaagtgcggtggtattgacaagagaactattgag
aagtttgagaaggaagcctccgagatgggtaaaggttctttcaaatacgcctgggtttta
gataagcttaaagccgagagagaaagaggtatcaccattgatatcgctttatggaaattt
gagactccaaaataccacgttactgttattgatgctccaggtcacagagatttcatcaag
aacatgatcactggtacctctcaggctgactgtgctatcttgattattgccggtggtgtt
ggtgaattcgaggccggtatctccaaggatggtcagaccagagaacatgctttgttggct
tacactttgggtgtcagacaattgattgttgccgtcaataagatggactcggtcaaatgg
tctgaagaaagattcgaggagatcaaaaaggaagtttccaacttcatcaagaaggttggt
tacaatccaaagaaggttccgttcgttccaatctcgggttggaacggtgataatatgatt
gagccttccaccaactgtccatggtacaagggatggaccaaggaggcaaagtccggtgtc
gtcaagggtaaaacattgttggaggctattgactctatcgagcctccttctagaccagtc
aacaagccattgagattaccattgcaggatgtctacaagattggtggtattggaactgtg
ccagtgggtagagttgaaaccggtaccatcaaggccggtatgaccgtcacctttgcccca
gttggtgttacatctgaagtcaagtctgtcgaaatgcatcacgaaactctcgttaacggt
ggtactccaggtgacaacgtcggattcaacgtcaagaatgtttctgtcaaggaaatcaaa
agaggctatgttgccggtgacgttaagaacgatcctccaaagggatgcacttctttcact
gctcaggtcattattttgaaccacccaggtcagattcaagctggttattctccagtcttg
gactgccacactgctcatatttcttgcagatttgacgagttactcgagaagattgacaga
agaactggtaagaagaccgaggatcaccctaagtctatcaaaagaggagatgccgctatg
gtcaaaatggttccaaccaagccaatgtgtgtcgaggctttcaccgactacccacctttg
ggaagattcgctgttagagacatgagacagactgttgctgtcggtgtcatcaagtctgtc
gtgaagacagacaaggttgccatcaaataa
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