KEGG   Brettanomyces nanus: FOA43_003908
Entry
FOA43_003908      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K10841  DNA excision repair protein ERCC-6
Organism
bnn  Brettanomyces nanus
Pathway
bnn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FOA43_003908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bnn03036]
    FOA43_003908
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_003908
Chromosome and associated proteins [BR:bnn03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    FOA43_003908
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      FOA43_003908
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3
Other DBs
NCBI-GeneID: 62197308
NCBI-ProteinID: XP_038780084
UniProt: A0A875SAA7
LinkDB
Position
4:1456417..1460124
AA seq 1235 aa
MENANDNDKKDINGPQNADPDEFFHLSIEDQEVDMSERSQDSGTEKVTGIPTDTEMEPFS
LETLGVKFVEQNSLERTVAEQADKAIAEKSVELEKKRLERALKKLYQLQGKVRSLRSRLD
TSYARISEKDRVRHHIDDLEKGDLIQAVTDVKEIRERLHQAEVSIRSQSSTLRGNVEKDE
SPGKDVTSTDRVKRLPDETQQEYLIRTGKVTAFGSANGFIEEIDDDNEADKVPLPSHQNL
HVPGLDDVSKEVKEENNESQRTGLLEKSVLDNSEGDSHDDADYEEPFGIGESGDEYEEDN
STVDDDDIDVSKPHKEGEDEDFKNIDDGEEEVFQRRLTQWTAKRSSLRTLKRPDYVDDLD
KPEWEKPHPVSNDAILNDEFHVPGDIYPALFDYQKTGVQWLWELYSQRTGGIVGDEMGLG
KTVQVIAFLAGLHYSRKLTKPVLVVCPATVLSQWCNEFHRWWPAFRTMILHSIGSGMSTK
KRTHGDLGSEEERWDENLEDEGYGGHERSSHSIMNEHNAKELIRKVIKDGHVIITTYVGV
RIYAKYLLPVHWEYVVLDEGHKIRNPDSYITLTCKQLKTHNRVILSGTPIQNNLVELWSL
FDFIFPGRLGTLPVFQKQFCIPINLGGYANATNVQVQAGYKCAVILKDLISPYLLRRVKA
DVAQDLPKKSEMVLFCELTRRQRTMYENFLHSEDLQRILKGKRNALYGIDVLRKICNHPD
LVISMDSKKAATKEKPQYKTSAELSELSGKLHVVSMLLRLWNKEDRKALLFTQTRQMLNI
FQDFMEKLNQETGNTYGYLRMDGTTPISERQKLVDSFNNNPKYKVFLLTTRVGGLGINLT
GASRVIIYDPDWNPSTDIQARERAWRLGQKKDVTIYRLMVAGSIEEKIYHRQIFKQFLTN
KILKDPKQKRFFKMTDMYDLFTLGDQDTKGTETADLFGARETNYQGSKERKSRYLSGVRR
KGHKSTSSEKDVDSDDFLAVSQMKGVASIQEYDTGEGSKPKGGNGNDDDIGLVSQIFKRS
GVHSALEHDSILGRPEGSSFVGAIESEANRIARDAVEALRDSRKVARRSSVGVPTWTGRF
GSAGRKINMRPTGGQRFKRKILPGHSDSSRGRNASTGVAITHGSSSLSSYSILQSMENKS
KDVGTLRPIDGRISRRSPSSTGAVDDSKKTKDLITRLSGYLAGVKDYFSTSSEILDHLNI
DVSDEKEVKILRSMLRSICKWDKVKRGWVLNEEFR
NT seq 3708 nt   +upstreamnt  +downstreamnt
atggagaatgccaacgataacgataaaaaggacattaatggacctcagaatgctgatcca
gatgagtttttccatctgtccatcgaggatcaagaggtagatatgtccgagagatcacag
gattcagggacagaaaaggtaacaggtattccaacagatactgagatggagcctttctca
cttgaaactttaggggtgaagtttgtggagcagaattctttggaaagaactgttgctgag
caagcggataaggcgatagcggagaagagcgtggaacttgagaagaaaagactagaaaga
gctctcaagaagttgtatcagctacagggtaaagtgagatcattaagatcaaggttggat
actagctatgctcgtatctctgaaaaagatagagttagacatcatatcgatgatttggag
aaaggagatttgatacaggctgtcaccgatgtgaaggagattagagagaggcttcatcag
gcggaggtttcaattcgttcccaatcttcaactctacggggaaatgttgagaaggatgag
agtccaggaaaagatgtgacttccactgatcgtgtaaagcgacttcctgacgaaacacag
caagaatatcttataagaacaggtaaagtgactgcttttggtagtgcaaatggctttatc
gaagagatcgatgacgataatgaagctgataaggtgcctttaccttcgcatcagaatttg
catgttccagggttggatgatgtttcaaaagaagtgaaggaggagaataatgaatcacaa
cgtactggccttcttgagaagagtgttctcgataatagtgagggtgattctcacgatgat
gctgattacgaggaaccttttggtattggagagagtggtgacgagtatgaagaggacaat
tctactgttgatgatgatgatatagatgtttccaagcctcataaagagggtgaggatgag
gacttcaaaaacattgatgatggtgaagaagaagtatttcaacgtcgattgacacaatgg
actgcgaagaggtcatcattgcgtactttgaaacgccccgattacgttgatgaccttgat
aagcctgagtgggagaagcctcatcccgtttccaatgatgccattcttaatgatgagttt
catgttcccggtgatatttatccggcgcttttcgattaccaaaagacaggtgttcaatgg
ctttgggagctatattcacaaagaactggcggtatcgtaggtgatgagatgggtttagga
aagacagtccaggtcattgcctttcttgctggtttacattattctcgaaaattaacgaag
cctgtcttagtcgtctgtcccgcaactgtactaagtcagtggtgtaatgaatttcataga
tggtggcctgctttcagaacaatgattttgcattcgataggcagtggcatgtccacaaag
aagcggacgcatggtgatttagggagcgaagaggagcgttgggacgaaaatctagaagat
gaagggtatggtggtcatgaacgcagttcgcatagtattatgaatgagcataatgctaag
gagctgattcgaaaagttataaaggatggtcatgttatcatcaccacttacgttggtgtt
cggatttatgctaaatatcttcttccagtacattgggagtatgtggttcttgatgagggc
cataagattcgtaaccccgatagttacattacactcacctgcaagcagctcaaaacacat
aatagagtcattctcagcggtactcccattcaaaacaacttagtggagttatggagtttg
tttgatttcatattccctggaaggctcggtactttgccagtatttcagaagcagttctgc
attccaattaatctcggtggctatgccaacgcaaccaatgtccaagtacaagccggttac
aaatgtgccgtcattttgaaggatcttatttcaccataccttctccgtcgagttaaggcc
gatgtagcacaggatttaccaaaaaaatctgagatggttctattttgtgaattgacacgt
cgtcagagaaccatgtatgaaaatttccttcattctgaagatttgcaacggatattgaaa
ggtaaacggaatgcattatatggcattgatgttttgagaaagatctgcaaccatccggat
ttggtaatttcgatggatagtaagaaggctgccacaaaagaaaaacctcaatataaaaca
tctgcggagttgtctgaattgtcaggtaagttgcatgttgtcagcatgttgttacggttg
tggaacaaggaagatcgcaaagctctactattcacacagacacgccaaatgttgaatata
tttcaagactttatggagaaattgaaccaggaaactggtaacacgtatggctatttaagg
atggatggcaccacacctatttccgaaagacagaagctagtggactcgtttaataataac
ccgaagtataaggtctttcttttaacgacacgtgttggtggattggggatcaatttaact
ggtgctagtcgtgtgatcatttacgatcccgattggaacccgtccactgacattcaggct
cgtgaaagagcttggagattgggtcaaaagaaagatgttactatttatcgattaatggtt
gctggatccattgaggagaaaatttaccatcggcaaatcttcaaacagtttttgacaaat
aagattcttaaagacccgaagcagaagcgattttttaagatgactgacatgtatgatcta
tttaccttgggtgatcaggacactaaaggtaccgaaactgcagatctttttggcgccaga
gaaacaaattatcaggggagtaaagaacggaagtccagatacctaagcggtgtcagaaga
aaaggccacaagtcaactagttcggagaaggatgttgactcagatgattttctggcggtc
tctcaaatgaagggagttgccagtatccaagagtatgatacaggagagggtagtaagcca
aagggaggaaatggtaatgacgatgatatagggcttgtatctcagatcttcaaacgttca
ggtgtgcattctgcccttgagcatgactcgatattgggtcgcccagaggggtctagcttt
gtgggagcgattgaaagtgaagcaaatcgaatagccagagatgctgttgaagcattgcga
gattcgcgtaaagtggctaggcgttcaagtgttggagttccgacatggactggtcgtttc
ggttcggctggaaggaagataaatatgagacccactggtgggcagcgttttaagcgcaaa
atactgccaggtcattctgattcatctagaggcagaaacgctagtacaggtgttgctatc
actcatggtagctcaagtttatcgtcctattcgattcttcaaagcatggaaaataaatca
aaagatgtcggcactttacgccctattgacggtcgaatcagtcgtcgcagtcccagtagc
acaggtgccgttgatgattcgaaaaaaacaaaggacttgattactaggcttagtggttac
ttggcaggtgttaaagattattttagtacgtctagtgagattcttgatcatttaaatatt
gatgtctccgacgaaaaggaggtgaaaattctccggtcaatgttgaggtccatatgtaaa
tgggacaaggtaaagaggggctgggtgcttaacgaagagttcagatag

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