Brettanomyces nanus: FOA43_003908
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Entry
FOA43_003908 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
bnn
Brettanomyces nanus
Pathway
bnn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOA43_003908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_003908
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_003908
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
FOA43_003908
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
FOA43_003908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
62197308
NCBI-ProteinID:
XP_038780084
UniProt:
A0A875SAA7
LinkDB
All DBs
Position
4:1456417..1460124
Genome browser
AA seq
1235 aa
AA seq
DB search
MENANDNDKKDINGPQNADPDEFFHLSIEDQEVDMSERSQDSGTEKVTGIPTDTEMEPFS
LETLGVKFVEQNSLERTVAEQADKAIAEKSVELEKKRLERALKKLYQLQGKVRSLRSRLD
TSYARISEKDRVRHHIDDLEKGDLIQAVTDVKEIRERLHQAEVSIRSQSSTLRGNVEKDE
SPGKDVTSTDRVKRLPDETQQEYLIRTGKVTAFGSANGFIEEIDDDNEADKVPLPSHQNL
HVPGLDDVSKEVKEENNESQRTGLLEKSVLDNSEGDSHDDADYEEPFGIGESGDEYEEDN
STVDDDDIDVSKPHKEGEDEDFKNIDDGEEEVFQRRLTQWTAKRSSLRTLKRPDYVDDLD
KPEWEKPHPVSNDAILNDEFHVPGDIYPALFDYQKTGVQWLWELYSQRTGGIVGDEMGLG
KTVQVIAFLAGLHYSRKLTKPVLVVCPATVLSQWCNEFHRWWPAFRTMILHSIGSGMSTK
KRTHGDLGSEEERWDENLEDEGYGGHERSSHSIMNEHNAKELIRKVIKDGHVIITTYVGV
RIYAKYLLPVHWEYVVLDEGHKIRNPDSYITLTCKQLKTHNRVILSGTPIQNNLVELWSL
FDFIFPGRLGTLPVFQKQFCIPINLGGYANATNVQVQAGYKCAVILKDLISPYLLRRVKA
DVAQDLPKKSEMVLFCELTRRQRTMYENFLHSEDLQRILKGKRNALYGIDVLRKICNHPD
LVISMDSKKAATKEKPQYKTSAELSELSGKLHVVSMLLRLWNKEDRKALLFTQTRQMLNI
FQDFMEKLNQETGNTYGYLRMDGTTPISERQKLVDSFNNNPKYKVFLLTTRVGGLGINLT
GASRVIIYDPDWNPSTDIQARERAWRLGQKKDVTIYRLMVAGSIEEKIYHRQIFKQFLTN
KILKDPKQKRFFKMTDMYDLFTLGDQDTKGTETADLFGARETNYQGSKERKSRYLSGVRR
KGHKSTSSEKDVDSDDFLAVSQMKGVASIQEYDTGEGSKPKGGNGNDDDIGLVSQIFKRS
GVHSALEHDSILGRPEGSSFVGAIESEANRIARDAVEALRDSRKVARRSSVGVPTWTGRF
GSAGRKINMRPTGGQRFKRKILPGHSDSSRGRNASTGVAITHGSSSLSSYSILQSMENKS
KDVGTLRPIDGRISRRSPSSTGAVDDSKKTKDLITRLSGYLAGVKDYFSTSSEILDHLNI
DVSDEKEVKILRSMLRSICKWDKVKRGWVLNEEFR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgccaacgataacgataaaaaggacattaatggacctcagaatgctgatcca
gatgagtttttccatctgtccatcgaggatcaagaggtagatatgtccgagagatcacag
gattcagggacagaaaaggtaacaggtattccaacagatactgagatggagcctttctca
cttgaaactttaggggtgaagtttgtggagcagaattctttggaaagaactgttgctgag
caagcggataaggcgatagcggagaagagcgtggaacttgagaagaaaagactagaaaga
gctctcaagaagttgtatcagctacagggtaaagtgagatcattaagatcaaggttggat
actagctatgctcgtatctctgaaaaagatagagttagacatcatatcgatgatttggag
aaaggagatttgatacaggctgtcaccgatgtgaaggagattagagagaggcttcatcag
gcggaggtttcaattcgttcccaatcttcaactctacggggaaatgttgagaaggatgag
agtccaggaaaagatgtgacttccactgatcgtgtaaagcgacttcctgacgaaacacag
caagaatatcttataagaacaggtaaagtgactgcttttggtagtgcaaatggctttatc
gaagagatcgatgacgataatgaagctgataaggtgcctttaccttcgcatcagaatttg
catgttccagggttggatgatgtttcaaaagaagtgaaggaggagaataatgaatcacaa
cgtactggccttcttgagaagagtgttctcgataatagtgagggtgattctcacgatgat
gctgattacgaggaaccttttggtattggagagagtggtgacgagtatgaagaggacaat
tctactgttgatgatgatgatatagatgtttccaagcctcataaagagggtgaggatgag
gacttcaaaaacattgatgatggtgaagaagaagtatttcaacgtcgattgacacaatgg
actgcgaagaggtcatcattgcgtactttgaaacgccccgattacgttgatgaccttgat
aagcctgagtgggagaagcctcatcccgtttccaatgatgccattcttaatgatgagttt
catgttcccggtgatatttatccggcgcttttcgattaccaaaagacaggtgttcaatgg
ctttgggagctatattcacaaagaactggcggtatcgtaggtgatgagatgggtttagga
aagacagtccaggtcattgcctttcttgctggtttacattattctcgaaaattaacgaag
cctgtcttagtcgtctgtcccgcaactgtactaagtcagtggtgtaatgaatttcataga
tggtggcctgctttcagaacaatgattttgcattcgataggcagtggcatgtccacaaag
aagcggacgcatggtgatttagggagcgaagaggagcgttgggacgaaaatctagaagat
gaagggtatggtggtcatgaacgcagttcgcatagtattatgaatgagcataatgctaag
gagctgattcgaaaagttataaaggatggtcatgttatcatcaccacttacgttggtgtt
cggatttatgctaaatatcttcttccagtacattgggagtatgtggttcttgatgagggc
cataagattcgtaaccccgatagttacattacactcacctgcaagcagctcaaaacacat
aatagagtcattctcagcggtactcccattcaaaacaacttagtggagttatggagtttg
tttgatttcatattccctggaaggctcggtactttgccagtatttcagaagcagttctgc
attccaattaatctcggtggctatgccaacgcaaccaatgtccaagtacaagccggttac
aaatgtgccgtcattttgaaggatcttatttcaccataccttctccgtcgagttaaggcc
gatgtagcacaggatttaccaaaaaaatctgagatggttctattttgtgaattgacacgt
cgtcagagaaccatgtatgaaaatttccttcattctgaagatttgcaacggatattgaaa
ggtaaacggaatgcattatatggcattgatgttttgagaaagatctgcaaccatccggat
ttggtaatttcgatggatagtaagaaggctgccacaaaagaaaaacctcaatataaaaca
tctgcggagttgtctgaattgtcaggtaagttgcatgttgtcagcatgttgttacggttg
tggaacaaggaagatcgcaaagctctactattcacacagacacgccaaatgttgaatata
tttcaagactttatggagaaattgaaccaggaaactggtaacacgtatggctatttaagg
atggatggcaccacacctatttccgaaagacagaagctagtggactcgtttaataataac
ccgaagtataaggtctttcttttaacgacacgtgttggtggattggggatcaatttaact
ggtgctagtcgtgtgatcatttacgatcccgattggaacccgtccactgacattcaggct
cgtgaaagagcttggagattgggtcaaaagaaagatgttactatttatcgattaatggtt
gctggatccattgaggagaaaatttaccatcggcaaatcttcaaacagtttttgacaaat
aagattcttaaagacccgaagcagaagcgattttttaagatgactgacatgtatgatcta
tttaccttgggtgatcaggacactaaaggtaccgaaactgcagatctttttggcgccaga
gaaacaaattatcaggggagtaaagaacggaagtccagatacctaagcggtgtcagaaga
aaaggccacaagtcaactagttcggagaaggatgttgactcagatgattttctggcggtc
tctcaaatgaagggagttgccagtatccaagagtatgatacaggagagggtagtaagcca
aagggaggaaatggtaatgacgatgatatagggcttgtatctcagatcttcaaacgttca
ggtgtgcattctgcccttgagcatgactcgatattgggtcgcccagaggggtctagcttt
gtgggagcgattgaaagtgaagcaaatcgaatagccagagatgctgttgaagcattgcga
gattcgcgtaaagtggctaggcgttcaagtgttggagttccgacatggactggtcgtttc
ggttcggctggaaggaagataaatatgagacccactggtgggcagcgttttaagcgcaaa
atactgccaggtcattctgattcatctagaggcagaaacgctagtacaggtgttgctatc
actcatggtagctcaagtttatcgtcctattcgattcttcaaagcatggaaaataaatca
aaagatgtcggcactttacgccctattgacggtcgaatcagtcgtcgcagtcccagtagc
acaggtgccgttgatgattcgaaaaaaacaaaggacttgattactaggcttagtggttac
ttggcaggtgttaaagattattttagtacgtctagtgagattcttgatcatttaaatatt
gatgtctccgacgaaaaggaggtgaaaattctccggtcaatgttgaggtccatatgtaaa
tgggacaaggtaaagaggggctgggtgcttaacgaagagttcagatag
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